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cn_combo_scaffold_4188

Alias: THIO1207_19

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4188_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..127)
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003713192
hypothetical protein; K02221 YggT family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
cn_combo_scaffold_4188_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(124..939)
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
pyrroline-5-carboxylate reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003684BA5
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
cn_combo_scaffold_4188_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(932..1639)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003790E2F
hypothetical protein; K06997 Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_4188_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1727..2770
DNA (1044bp) protein (348aa)
Pilus retraction protein PilT n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG78_THIDA
pilus retraction ATPase PilT
pilus retraction ATPase PilT; K02669 twitching motility protein PilT Tax=GWE1_Thiobacillus_62_9_curated
cn_combo_scaffold_4188_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2816..3961
DNA (1146bp) protein (382aa)
Pilus retraction protein PilT id=1358217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
pilus retraction protein PilT; K02670 twitching motility protein PilU Tax=GWE1_Thiobacillus_62_9_curated
pilus retraction protein PilT
cn_combo_scaffold_4188_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3989..8206)
DNA (4218bp) protein (1406aa)
Flagellar motor protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CU79_9BURK
Flagellar motor protein {ECO:0000313|EMBL:EJL78311.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
hypothetical protein
cn_combo_scaffold_4188_7
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8209..15852)
DNA (7644bp) protein (2548aa)
Conserved repeat domain protein (Fragment) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4I4_9RHOB
Conserved repeat domain protein {ECO:0000313|EMBL:EEW24067.1}; Flags: Precursor; Fragment;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhod
transcriptional regulator, AraC family with Parallel beta-helix repeat
cn_combo_scaffold_4188_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16041..17267)
DNA (1227bp) protein (409aa)
N6-adenine-specific DNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=GWE1_Thiobacillus_62_9_curated
N6-adenine-specific DNA methylase id=1358215 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
N-6 adenine-specific DNA methylase
cn_combo_scaffold_4188_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17325..17738)
DNA (414bp) protein (138aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003622A21
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98378.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
Displaying 9 items

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