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cn_combo_scaffold_4185

Alias: THIO1207_20

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4185_1
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2187)
DNA (2187bp) protein (729aa)
magnesium transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000379F089
divalent cation transporter; K06213 magnesium transporter Tax=RBG_16_Gallionellales_57_15_curated
divalent cation transporter
cn_combo_scaffold_4185_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2562..2696
DNA (135bp) protein (45aa)
ISRSO18-transposase protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQX4_THISH
Transposase {ECO:0000313|EMBL:GAO36982.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ISRSO18-transposase
cn_combo_scaffold_4185_3
unknown

Not on your lists

2859..3101
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_4185_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3102..3674
DNA (573bp) protein (191aa)
hypothetical protein id=12497249 bin=THIO_MID species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79747.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
cn_combo_scaffold_4185_5
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3671..12103
DNA (8433bp) protein (2811aa)
Ca2+-binding protein, RTX toxin n=1 Tax=Herbaspirillum sp. YR522 RepID=J2WC77_9BURK
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
cn_combo_scaffold_4185_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12310..14439
DNA (2130bp) protein (710aa)
Protein-1 exporter id=1323110 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
protein-1 exporter Tax=GWE1_Thiobacillus_62_9_curated
Type I secretion system ABC transporter, HlyB family
cn_combo_scaffold_4185_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14450..15865
DNA (1416bp) protein (472aa)
hlyD; HlyD-family type I secretion protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
HlyD-family type I secretion protein id=1323113 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hlyD; HlyD-family type I secretion protein
cn_combo_scaffold_4185_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15783..16460)
DNA (678bp) protein (226aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
peptidoglycan transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F4369
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
cn_combo_scaffold_4185_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16457..17203)
DNA (747bp) protein (249aa)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
shikimate dehydrogenase (EC:1.1.1.25)
shikimate 5-dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003622F6A
cn_combo_scaffold_4185_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17382..17837)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036017A7
rhodanese-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rhodanese-like protein
cn_combo_scaffold_4185_11
unknown

Not on your lists

18119..18178
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 11 items

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