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cn_combo_scaffold_4716

Alias: THIO1207_22

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4716_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..720)
DNA (720bp) protein (240aa)
dihydrouridine synthase; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] Tax=GWE1_Thiobacillus_62_9_curated
tRNA-dihydrouridine synthase B n=1 Tax=Thiobacillus thioparus RepID=UPI0003722868
dihydrouridine synthase
cn_combo_scaffold_4716_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

840..1268
DNA (429bp) protein (143aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Thiobacillus thioparus RepID=UPI000377F848
mscL; large conductance mechanosensitive channel protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
mscL; large conductance mechanosensitive channel protein
cn_combo_scaffold_4716_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1415..2623
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036111D5
outer membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
outer membrane protein
cn_combo_scaffold_4716_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2704..3327)
DNA (624bp) protein (208aa)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cn_combo_scaffold_4716_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3335..4270)
DNA (936bp) protein (312aa)
rhodanese; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J1P2_9GAMM
rhodanese domain-containing protein
cn_combo_scaffold_4716_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4295..4480)
DNA (186bp) protein (62aa)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cn_combo_scaffold_4716_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4494..4772)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JV71_9GAMM
hypothetical protein
Uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cn_combo_scaffold_4716_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4781..5071)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JNH6_9GAMM
hypothetical protein
Uncharacterized protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cn_combo_scaffold_4716_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5068..6036)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LHC4_9GAMM
hypothetical protein
Uncharacterized protein Tax=CG_Rhodocyc_01
cn_combo_scaffold_4716_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6048..6320)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J1N8_9GAMM
hypothetical protein
Uncharacterized protein Tax=CG_Rhodocyc_01
cn_combo_scaffold_4716_11
unknown

Not on your lists

comp(6331..6423)
DNA (93bp) protein (31aa)

This feature has no annotations

cn_combo_scaffold_4716_12
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..6640)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JV66_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ16170.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
cn_combo_scaffold_4716_13
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6652..6960)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JNH1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ16169.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
SirA family protein
cn_combo_scaffold_4716_14
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6988..7677)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LHB9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ16168.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
hypothetical protein
cn_combo_scaffold_4716_15
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7682..8173)
DNA (492bp) protein (164aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4J1N2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH19069.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
cn_combo_scaffold_4716_16
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8325..9683)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036B2D56
Uncharacterized protein {ECO:0000313|EMBL:AKH19068.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
sigma-54-dependent transcriptional response regulator
cn_combo_scaffold_4716_17
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9686..11146)
DNA (1461bp) protein (487aa)
histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000367A9D0
Uncharacterized protein {ECO:0000313|EMBL:AKH19067.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
cn_combo_scaffold_4716_18
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11143..12006)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036CD7A5
Uncharacterized protein {ECO:0000313|EMBL:AKH19066.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
phosphonate ABC transporter periplasmic phosphonate-binding protein
cn_combo_scaffold_4716_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12092..12781)
DNA (690bp) protein (230aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9551
cn_combo_scaffold_4716_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12848..13846)
DNA (999bp) protein (333aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9551
Displaying 20 items

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