ggKbase home page

cn_combo_scaffold_4770

Alias: THIO1207_25

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4770_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1184)
DNA (1182bp) protein (394aa)
putative FAD-dependent dehydrogenase; K07137 id=12494572 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
FAD-dependent dehydrogenase
Putative FAD-dependent dehydrogenase {ECO:0000313|EMBL:AAZ97690.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
cn_combo_scaffold_4770_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1444..2085)
DNA (642bp) protein (214aa)
putative transmembrane protein; K07007 Tax=GWE1_Thiobacillus_62_9_curated
Putative transmembrane protein id=1320296 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
cn_combo_scaffold_4770_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2031..2654)
DNA (624bp) protein (208aa)
putative transmembrane protein; K07007 id=12494573 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AAZ97691.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
cn_combo_scaffold_4770_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2717..3016)
DNA (300bp) protein (100aa)
Plasmid stabilization system n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA27_9PROT
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:BAN35130.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
cn_combo_scaffold_4770_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3013..3285)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGI8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDH46507.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
cn_combo_scaffold_4770_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3425..4483)
DNA (1059bp) protein (353aa)
glycosyl transferase family 4; K02851 UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33] Tax=CG_Rhodocyc_01
Glycosyl transferase family 4 n=1 Tax=Thauera aminoaromatica S2 RepID=N6Z6G9_9RHOO
glycosyl transferase family 4
cn_combo_scaffold_4770_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4805..5104)
DNA (300bp) protein (100aa)
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYC6_THIK1
histone family protein nucleoid-structuring protein H-NS
Histone family protein nucleoid-structuring protein H-NS {ECO:0000313|EMBL:ADG30234.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomon
cn_combo_scaffold_4770_8
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5178..5984)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI00035E8E96
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
hypothetical protein
cn_combo_scaffold_4770_9
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5935..6978)
DNA (1044bp) protein (348aa)
Glycosyl transferase group 1 n=1 Tax=Geobacter sp. (strain M21) RepID=C6E0K9_GEOSM
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACT18633.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp.
cn_combo_scaffold_4770_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7034..8245)
DNA (1212bp) protein (404aa)
Wzy n=1 Tax=Escherichia coli RepID=E5FGD1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHI93205.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
hypothetical protein
cn_combo_scaffold_4770_11
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8242..9066)
DNA (825bp) protein (275aa)
Glycosyl transferase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3CZ43_9BURK
Glycosyl transferase {ECO:0000313|EMBL:EJL81444.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp.
family 2 glycosyl transferase
cn_combo_scaffold_4770_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9164..10384)
DNA (1221bp) protein (407aa)
Putative glycosyltransferase ypjH id=1295756 bin=GWE1_T_denit_62_9 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycosyltransferase Tax=GWE1_Thiobacillus_62_9_curated
group 1 glycosyl transferase
cn_combo_scaffold_4770_13
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10381..11121)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B50C78
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:ABW26274.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017)
cn_combo_scaffold_4770_14
Marinobacter sp. EN3, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..11824)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI000308517C
Uncharacterized protein {ECO:0000313|EMBL:ERS11286.1}; TaxID=1397533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
type 11 methyltransferase
cn_combo_scaffold_4770_15
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11828..13045)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI000370B3C9
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADC72061.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
cn_combo_scaffold_4770_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13213..13890)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CC46A
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
EpsI family protein
cn_combo_scaffold_4770_17
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..14572)
DNA (666bp) protein (222aa)
Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z35_RHOFD
lipopolysaccharide biosynthesis Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
lipopolysaccharide biosynthesis
Displaying 17 items

View Taxonomy