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cn_combo_scaffold_15873

Alias: THIO1207_120

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_15873_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1054
DNA (1053bp) protein (351aa)
general secretory pathway protein E id=12498045 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
general secretory pathway protein E
General secretory pathway protein E {ECO:0000313|EMBL:BAN35142.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
cn_combo_scaffold_15873_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1068..2078
DNA (1011bp) protein (337aa)
general secretion pathway protein F id=12498046 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
general secretion pathway protein F
General secretion pathway protein F {ECO:0000313|EMBL:BAN35143.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
cn_combo_scaffold_15873_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2027..2194
DNA (168bp) protein (56aa)
general secretion pathway protein F id=12498046 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
General secretion pathway protein F {ECO:0000313|EMBL:GAO34643.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
general secretion pathway protein F
cn_combo_scaffold_15873_4
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2227..2652
DNA (426bp) protein (142aa)
gspG; general secretory pathway protein G, type II secretion system; K02456 general secretion pathway protein G id=12498047 bin=THIO_MID species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
secretion system protein G
Secretion system protein G {ECO:0000313|EMBL:AJW43512.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitol
cn_combo_scaffold_15873_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2625..3047
DNA (423bp) protein (141aa)
general secretion pathway protein H id=12498048 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
General secretion pathway protein H {ECO:0000313|EMBL:GAO34646.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
general secretion pathway protein H
cn_combo_scaffold_15873_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3044..3421
DNA (378bp) protein (126aa)
general secretion pathway protein I id=12498049 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:BAN35147.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfu
cn_combo_scaffold_15873_7
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..3942
DNA (525bp) protein (175aa)
general secretion pathway protein J id=12498050 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
general secretion pathway protein J Tax=CG_Beta_01
general secretion pathway protein J
cn_combo_scaffold_15873_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3961..4800
DNA (840bp) protein (280aa)
general secretion pathway protein K id=12498051 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulf
cn_combo_scaffold_15873_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4818..6059
DNA (1242bp) protein (414aa)
hypothetical protein id=12498052 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35150.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
cn_combo_scaffold_15873_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6056..6541
DNA (486bp) protein (162aa)
hypothetical protein id=12498053 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35151.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
cn_combo_scaffold_15873_11
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6538..7281
DNA (744bp) protein (248aa)
id=12494457 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
id=12494457 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
cn_combo_scaffold_15873_12
unknown

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7285..7380
DNA (96bp) protein (32aa)

This feature has no annotations

cn_combo_scaffold_15873_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7405..7989
DNA (585bp) protein (195aa)
heme exporter protein CcmA id=12494456 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heme exporter protein CcmA Tax=CG_Hydro_01
heme exporter protein CcmA
cn_combo_scaffold_15873_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8024..8716
DNA (693bp) protein (231aa)
heme exporter protein CcmB id=12494455 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
heme exporter protein CcmB Tax=CG_Hydro_01
heme exporter protein CcmB
cn_combo_scaffold_15873_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8720..9454
DNA (735bp) protein (245aa)
heme exporter protein CcmC; K02195 heme exporter protein C id=12494454 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:ACV34072.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-
cn_combo_scaffold_15873_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9451..9624
DNA (174bp) protein (58aa)
hypothetical protein; K02196 heme exporter protein D id=12494453 bin=THIO_HI species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ccmD; cytochrome c-type biogenesis protein Tax=CG_Hydro_01
heme exporter protein CcmD
cn_combo_scaffold_15873_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9644..10096
DNA (453bp) protein (151aa)
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE id=12494452 bin=THIO_HI species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein CcmE {ECO:0000255|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000255|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000255|HAMAP-Rule:MF_01959};
cn_combo_scaffold_15873_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..11561
DNA (1392bp) protein (464aa)
ccmF_[H]; Cytochrome c heme lyase subunit CcmF id=12494451 bin=THIO_HI species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ccmF_[H]; Cytochrome c heme lyase subunit CcmF Tax=CG_Hydro_01
ccmF_[H]; Cytochrome c heme lyase subunit CcmF
cn_combo_scaffold_15873_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11612..12154
DNA (543bp) protein (181aa)
ccmF_[H]; Cytochrome c heme lyase subunit CcmF id=12494451 bin=THIO_HI species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ccmF_[H]; Cytochrome c heme lyase subunit CcmF Tax=CG_Hydro_01
heme lyase subunit CcmF
cn_combo_scaffold_15873_20
unknown

Not on your lists

comp(12094..12432)
DNA (339bp) protein (113aa)

This feature has no annotations

cn_combo_scaffold_15873_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12636..13115
DNA (480bp) protein (160aa)
cytochrome C biogenesis protein id=12494449 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=CG_Hydro_01
cytochrome C biogenesis protein
cn_combo_scaffold_15873_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13112..13837
DNA (726bp) protein (242aa)
cycH_[H]; Cytochrome c heme lyase subunit CcmH id=12494448 bin=THIO_HI species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=CG_Hydro_01
cycH_[H]; Cytochrome c heme lyase subunit CcmH
cn_combo_scaffold_15873_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13843..14328
DNA (486bp) protein (162aa)
cycH_[H]; Cytochrome c heme lyase subunit CcmH id=12494448 bin=THIO_HI species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=CG_Hydro_01
TPR repeat-containing protein
cn_combo_scaffold_15873_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14840..15139
DNA (300bp) protein (100aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037194AE
Displaying 24 items

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