ggKbase home page

cn_combo_scaffold_21977

Alias: THIO1207_147

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_21977_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..449)
DNA (447bp) protein (149aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E6AD6
L-seryl-tRNA selenium transferase
cn_combo_scaffold_21977_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(498..1412)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371C5DC
formate dehydrogenase accessory protein FdhE; K02380 FdhE protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase accessory protein FdhE
cn_combo_scaffold_21977_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1475..2092)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367FEEF
fdoI; formate dehydrogenase, gamma subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase subunit gamma
cn_combo_scaffold_21977_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2089..2472)
DNA (384bp) protein (128aa)
formate dehydrogenase-N subunit beta n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C974B
formate dehydrogenase subunit beta; K00124 formate dehydrogenase, beta subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
fdnH-1; nitrate-inducible formate dehydrogenase subunit beta
cn_combo_scaffold_21977_5
unknown

Not on your lists

2844..3002
DNA (159bp) protein (53aa)

This feature has no annotations

cn_combo_scaffold_21977_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2999..4333)
DNA (1335bp) protein (445aa)
formate dehydrogenase subunit alpha (EC:1.7.99.4); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate dehydrogenase subunit alpha (EC:1.7.99.4)
formate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003696816
cn_combo_scaffold_21977_7
unknown

Not on your lists

4663..4905
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_21977_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5427..6014)
DNA (588bp) protein (196aa)
molybdopterin oxidoreductase Fe4S4 region; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfate ABC transporter substrate-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037384C5
molybdopterin oxidoreductase Fe4S4 region
cn_combo_scaffold_21977_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6259..6582)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037174E7
Uncharacterized protein {ECO:0000313|EMBL:GAO36891.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hypothetical protein
cn_combo_scaffold_21977_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6579..6848)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B128
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_21977_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..9426)
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820B7A
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
cn_combo_scaffold_21977_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..10187)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820B7A
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
integrase
cn_combo_scaffold_21977_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10740..11834
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DDF13
small-conductance mechanosensitive channel protein
Small-conductance mechanosensitive channel protein {ECO:0000313|EMBL:AAZ97415.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
cn_combo_scaffold_21977_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12141..12407
DNA (267bp) protein (89aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12493149 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
translation initiation factor IF-1
cn_combo_scaffold_21977_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12407..12712
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003821E6E
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cn_combo_scaffold_21977_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12791..13369
DNA (579bp) protein (193aa)
ErfK/YbiS/YcfS/YnhG family protein id=12493150 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ErfK/YbiS/YcfS/YnhG family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
Displaying 16 items

View Taxonomy