ggKbase home page

cn_combo_scaffold_40976

Alias: THIO1207_192

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_40976_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..406
DNA (405bp) protein (135aa)
putative succinylglutamate desuccinylase; K01175 [EC:3.1.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinylglutamate desuccinylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003794E7A
succinylglutamate desuccinylase
cn_combo_scaffold_40976_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(410..1210)
DNA (801bp) protein (267aa)
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=12496522 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
tyrosine recombinase XerD
cn_combo_scaffold_40976_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1191..1670)
DNA (480bp) protein (160aa)
methylated-DNA-(protein)-cysteine S-methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B6E16
methylated-DNA-(protein)-cysteine S-methyltransferase
cn_combo_scaffold_40976_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1698..2060)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAS0_9PROT
hypothetical protein Tax=CG_Beta_01
hypothetical protein
cn_combo_scaffold_40976_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2105..2398)
DNA (294bp) protein (98aa)
hypothetical protein id=12496524 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_40976_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2362..2949)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036354E6
TetR family transcriptional regulator
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
cn_combo_scaffold_40976_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3101..3436)
DNA (336bp) protein (112aa)
50S ribosomal protein L19 n=1 Tax=Thiobacillus thioparus RepID=UPI0003804A71
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rplS; 50S ribosomal protein L19
cn_combo_scaffold_40976_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3511..3939)
DNA (429bp) protein (143aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase id=1368684 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cn_combo_scaffold_40976_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3920..4243)
DNA (324bp) protein (108aa)
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FB5C0
cn_combo_scaffold_40976_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4243..4722)
DNA (480bp) protein (160aa)
16S rRNA-processing protein RimM n=1 Tax=Thiobacillus thioparus RepID=UPI0003781D21
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
16S rRNA-processing protein RimM
cn_combo_scaffold_40976_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4780..5034)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DB6FE
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S16
Displaying 11 items

View Taxonomy