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cn_combo_scaffold_2908

Alias: THIO756_83

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2908_1
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

1..432
DNA (432bp) protein (144aa)
ABC transporter permease {ECO:0000313|EMBL:KKW05335.1}; TaxID=1618342 species="Bacteria; candidate division CPR1.;" source="candidate division CPR1 bacterium GW2011_GWC1_49_13.;"
Putative uncharacterized protein id=2279127 bin=GWB2_Chloroflexi_54_36 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ABC transporter, permease protein
cn_combo_scaffold_2908_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

436..1545
DNA (1110bp) protein (370aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Chloroflexi_63_12_curated
Putative uncharacterized protein id=4176276 bin=GWC2_Chloroflexi_73_18 species=[Cellvibrio] gilvus genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative ABC transporter, permease protein
cn_combo_scaffold_2908_3
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

1549..2415
DNA (867bp) protein (289aa)
ABC transporter related protein n=1 Tax=uncultured bacterium RepID=K2BF10_9BACT
ABC transporter-like protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
ABC transporter, ATP-binding protein
cn_combo_scaffold_2908_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2550..3707
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ23_9PROT
hypothetical protein Tax=CG_Beta_01
hypothetical protein
cn_combo_scaffold_2908_5
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3877..4614
DNA (738bp) protein (246aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DU68_THIND
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
cn_combo_scaffold_2908_6
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4643..5131
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368FA6E
YHS domain-containing protein Tax=RBG_16_Betaproteobacteria_56_24_curated
YHS domain-containing protein
cn_combo_scaffold_2908_7
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5254..5442
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YZC6_9ALTE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ02430.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinob
cn_combo_scaffold_2908_8
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5454..5720
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=4384287 bin=GWF2_Ignavibacteria_35_20 species=Marinobacter manganoxydans genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
cn_combo_scaffold_2908_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5860..6045
DNA (186bp) protein (62aa)
cation transporting P-type ATPase (EC:3.6.3.-); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Heavy-metal transporting P-type ATPase id=3897379 bin=GWC2_Nitrospirae-rel_56_14 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATPase P
cn_combo_scaffold_2908_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6084..7244
DNA (1161bp) protein (387aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YN00_9ALTE
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
HI0933 family protein
cn_combo_scaffold_2908_11
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7264..8007
DNA (744bp) protein (248aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
ferredoxin-NADP reductase n=1 Tax=Thioalkalivibrio sp. ALJ16 RepID=UPI000380DD8A
oxidoreductase FAD/NAD(P)-binding domain-containing protein rbh
cn_combo_scaffold_2908_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8090..8500
DNA (411bp) protein (137aa)
Transcriptional regulator, MerR family n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QT59_CHRSD
MerR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
MerR family transcriptional regulator
cn_combo_scaffold_2908_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8704..8895
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NEB3_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
cn_combo_scaffold_2908_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8986..10323
DNA (1338bp) protein (446aa)
Cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CT10_SIDLE
Cyclopropane-fatty-acyl-phospholipid synthase
cn_combo_scaffold_2908_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10337..11332
DNA (996bp) protein (332aa)
Vitamin K epoxide reductase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ8_9SPHN
vitamin K epoxide reductase
Vitamin K epoxide reductase {ECO:0000313|EMBL:CCA93150.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
cn_combo_scaffold_2908_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11425..12924
DNA (1500bp) protein (500aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CCA93149.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CCA93149.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
dTDP-glucose 4,6-dehydratase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ7_9SPHN
cn_combo_scaffold_2908_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12905..13330
DNA (426bp) protein (142aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CCA93149.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CCA93149.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
dTDP-glucose 4,6-dehydratase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ7_9SPHN
cn_combo_scaffold_2908_18
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13555..14190
DNA (636bp) protein (212aa)
CBS domain protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TWT8_9GAMM
CBS domain protein
CBS domain protein {ECO:0000313|EMBL:AGS39630.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zan
cn_combo_scaffold_2908_19
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14411..15067
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1K8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EAU55183.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus fer
isoprenylcysteine carboxyl methyltransferase
cn_combo_scaffold_2908_20
unknown

Not on your lists

15064..15192
DNA (129bp) protein (43aa)

This feature has no annotations

cn_combo_scaffold_2908_21

Not on your lists

15189..15929
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T0XU06_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD26281.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
cn_combo_scaffold_2908_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..16413
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ91_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97276.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
cn_combo_scaffold_2908_23
unknown

Not on your lists

16448..16579
DNA (132bp) protein (44aa)

This feature has no annotations

cn_combo_scaffold_2908_24
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16614..19019
DNA (2406bp) protein (802aa)
Copper-translocating P-type ATPase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YQM2_9ALTE
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EHJ05501.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marin
ATPase P
cn_combo_scaffold_2908_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19016..19945
DNA (930bp) protein (310aa)
Nucleotidyl transferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1K9_NITHN
ADP-glucose pyrophosphorylase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
nucleotidyl transferase
cn_combo_scaffold_2908_26
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19942..21138
DNA (1197bp) protein (399aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YZD3_9ALTE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alt
Na(+)/H(+) antiporter nhaA
cn_combo_scaffold_2908_27
unknown

Not on your lists

21164..21283
DNA (120bp) protein (40aa)

This feature has no annotations

cn_combo_scaffold_2908_28
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21283..22545
DNA (1263bp) protein (421aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1163617 species="Bacteria; Proteobacteria; Betapro
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA7504
acetate kinase
cn_combo_scaffold_2908_29
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22520..23272
DNA (753bp) protein (251aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuri
Probable phosphoketolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF91_9PROT
xfp; phosphoketolase
cn_combo_scaffold_2908_30
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23272..24927
DNA (1656bp) protein (552aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuri
Probable phosphoketolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF91_9PROT
xfp; phosphoketolase
Displaying items 1-30 of 48 in total

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