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cn_combo_scaffold_16858

Alias: THIO756_62

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_16858_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
CbbY n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1710
HAD family hydrolase Tax=GWE1_Thiobacillus_62_9_curated
HAD family hydrolase
cn_combo_scaffold_16858_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589..1008
DNA (420bp) protein (140aa)
molecular chaperone DnaK n=1 Tax=Thiobacillus thioparus RepID=UPI0003688EE9
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
cn_combo_scaffold_16858_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1118..1561
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382EBED
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_16858_4
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1603..1821)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003824A24
putative signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:EPX96763.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08
cn_combo_scaffold_16858_5
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1970..2155)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A9D07
hypothetical protein id=12497967 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cn_combo_scaffold_16858_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..2993
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381BF68
winged helix family two component transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
winged helix family two component transcriptional regulator
cn_combo_scaffold_16858_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2990..3304
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037464E3
two component transcriptional regulator, sensor histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
integral membrane sensor signal transduction histidine kinase
cn_combo_scaffold_16858_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3301..4344
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037464E3
two component transcriptional regulator, sensor histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
two component transcriptional regulator, sensor histidine kinase
cn_combo_scaffold_16858_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4391..6475)
DNA (2085bp) protein (695aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
polynucleotide phosphorylase/polyadenylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D5EBA
polynucleotide phosphorylase
cn_combo_scaffold_16858_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6601..6870)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Thiobacillus thioparus RepID=UPI0003762619
30S ribosomal protein S15P; K02956 small subunit ribosomal protein S15 Tax=GWE1_Thiobacillus_62_9_curated
30S ribosomal protein S15
cn_combo_scaffold_16858_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6960..7856)
DNA (897bp) protein (299aa)
tRNA pseudouridine synthase B (EC:4.2.1.70) rbh
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthas
tRNA pseudouridine synthase B n=1 Tax=Thiobacillus thioparus RepID=UPI00037F3664
cn_combo_scaffold_16858_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7853..8227)
DNA (375bp) protein (125aa)
ribosome-binding factor A n=1 Tax=Thiobacillus thioparus RepID=UPI000372DC32
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=GWE1_Thiobacillus_62_9_curated
ribosome-binding factor A
cn_combo_scaffold_16858_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8227..8550)
DNA (324bp) protein (108aa)
translation initiation factor IF-2 n=1 Tax=Thiobacillus thioparus RepID=UPI000364F979
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=GWE1_Thiobacillus_62_9_curated
infB; translation initiation factor IF-2
cn_combo_scaffold_16858_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8507..10822)
DNA (2316bp) protein (772aa)
translation initiation factor IF-2 n=1 Tax=Thiobacillus thioparus RepID=UPI000364F979
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
infB; translation initiation factor IF-2
cn_combo_scaffold_16858_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..12310)
DNA (1479bp) protein (493aa)
peptidase M54 n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA69E
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thi
cn_combo_scaffold_16858_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12328..12717)
DNA (390bp) protein (130aa)
ribosome maturation protein RimP n=1 Tax=Thiobacillus thioparus RepID=UPI000374747A
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_16858_trna_1
unknown

Not on your lists

comp(12857..12940)
DNA (84bp)
transferRNA
Displaying 17 items

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