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cn_combo_scaffold_2020

Alias: NITRO20_27

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2020_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
cn_combo_scaffold_2020_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91..3657)
DNA (3567bp) protein (1189aa)
Chromosome partition protein Smc n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBB9_NITMU
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
chromosome segregation protein SMC rbh
cn_combo_scaffold_2020_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3801..4220
DNA (420bp) protein (140aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818}; EC=1.7.1.13 {ECO:0000255|HAMAP-Rule:MF_00818};; 7-cyano-7-carbaguanine reductase {ECO:0000255|HAMAP-Rule:MF_00818};
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=QUEF_NITMU
GTP cyclohydrolase I
cn_combo_scaffold_2020_4
unknown

Not on your lists

4482..4658
DNA (177bp) protein (59aa)

This feature has no annotations

cn_combo_scaffold_2020_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..5777)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC1_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73950.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2020_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5959..6288)
DNA (330bp) protein (110aa)
Ethidium bromide-methyl viologen resistance protein EmrE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIA1_9PROT
Multidrug transporter {ECO:0000313|EMBL:KIO50506.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. Np
small multidrug resistance protein
cn_combo_scaffold_2020_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6631..7794
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC3_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73948.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2020_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7867..9708
DNA (1842bp) protein (614aa)
Exonuclease RecJ {ECO:0000313|EMBL:ABB73947.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABB73947.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitr
Exonuclease RecJ n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC4_NITMU
single-stranded-DNA-specific exonuclease RecJ rbh
cn_combo_scaffold_2020_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9934..13401
DNA (3468bp) protein (1156aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323848 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC5_NITMU
transcription-repair coupling factor rbh
cn_combo_scaffold_2020_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13591..15300
DNA (1710bp) protein (570aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC6_NITMU
diguanylate cyclase rbh
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:ABB73945.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospi
cn_combo_scaffold_2020_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15304..16167)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC7_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB73944.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2020_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16662..17492
DNA (831bp) protein (277aa)
phosphoserine phosphatase SerB (EC:3.1.3.3) rbh
Phosphoserine phosphatase {ECO:0000313|EMBL:ABB73943.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ABB73943.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
Phosphoserine phosphatase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC8_NITMU
cn_combo_scaffold_2020_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17538..20180)
DNA (2643bp) protein (881aa)
TonB-dependent receptor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC9_NITMU
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABB73942.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2020_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20301..21524)
DNA (1224bp) protein (408aa)
Glycosyl hydrolase, BNR repeat n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD0_NITMU
BNR repeat-containing glycosyl hydrolase rbh
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:ABB73941.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
cn_combo_scaffold_2020_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21867..23135)
DNA (1269bp) protein (423aa)
Sodium:dicarboxylate symporter n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD1_NITMU
Sodium:dicarboxylate symporter rbh
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ABB73940.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
cn_combo_scaffold_2020_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23308..24366
DNA (1059bp) protein (353aa)
Glycosyl transferase, family 4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD2_NITMU
glycosyl transferase family protein rbh
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABB73939.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
cn_combo_scaffold_2020_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..26380
DNA (2034bp) protein (678aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD3_NITMU
polysaccharide biosynthesis protein CapD rbh
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ABB73938.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
cn_combo_scaffold_2020_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26756..27064)
DNA (309bp) protein (103aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBD4_NITMU
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABB73937.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nit
Displaying 18 items

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