ggKbase home page

cn_combo_scaffold_2203

Alias: NITRO20_36

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2203_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2229
DNA (2229bp) protein (743aa)
Outer membrane protein assembly factor BamA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB99_NITMU
surface antigen (D15)
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nit
cn_combo_scaffold_2203_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2244..2771
DNA (528bp) protein (176aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB98_NITMU
Outer membrane chaperone Skp
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ABB73973.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrososp
cn_combo_scaffold_2203_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2852..3292
DNA (441bp) protein (147aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=FABZ_NITMU
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
cn_combo_scaffold_2203_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3324..3965
DNA (642bp) protein (214aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=323848 species="Bacteria; Proteobacteria;
Ribonuclease HII n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RNH2_NITMU
cn_combo_scaffold_2203_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..4644
DNA (489bp) protein (163aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB95_NITMU
FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) {ECO:0000313|EMBL:ABB73976.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrososp
cn_combo_scaffold_2203_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4693..7314)
DNA (2622bp) protein (874aa)
DNA mismatch repair protein MutS n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=MUTS_NITMU
DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000255|HAMAP-Rule:MF_00096}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
cn_combo_scaffold_2203_7
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7509..8279)
DNA (771bp) protein (257aa)
hsdBR; Type-2 restriction enzyme BsuBI (EC:3.1.21.4)
Type-2 restriction enzyme BsuBI {ECO:0000313|EMBL:CCO22270.1}; EC=3.1.21.4 {ECO:0000313|EMBL:CCO22270.1};; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Des
Type-2 restriction enzyme BsuBI n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0R7U7_9DELT
cn_combo_scaffold_2203_8

Not on your lists

comp(8404..9693)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWX8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
cn_combo_scaffold_2203_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10500..13202)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB93_NITMU
Uncharacterized protein {ECO:0000313|EMBL:ABB73978.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
hypothetical protein
cn_combo_scaffold_2203_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13329..14150)
DNA (822bp) protein (274aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:ABB73979.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABB73979.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitros
Inositol-1(Or 4)-monophosphatase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB92_NITMU
cn_combo_scaffold_2203_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..15038
DNA (825bp) protein (275aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyltransferase TrmH, group 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB91_NITMU
RNA methyltransferase TrmH rbh
cn_combo_scaffold_2203_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15312..15785
DNA (474bp) protein (158aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB90_NITMU
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABB73981.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
cn_combo_scaffold_2203_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15849..17006
DNA (1158bp) protein (386aa)
class V aminotransferase (EC:2.8.1.7)
Aminotransferase, class V {ECO:0000313|EMBL:ABB73982.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ABB73982.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
Aminotransferase, class V n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB89_NITMU
cn_combo_scaffold_2203_14
unknown

Not on your lists

comp(17042..17194)
DNA (153bp) protein (51aa)

This feature has no annotations

cn_combo_scaffold_2203_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17329..18027
DNA (699bp) protein (233aa)
VacJ-like lipoprotein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB88_NITMU
VacJ-like lipoprotein
VacJ-like lipoprotein {ECO:0000313|EMBL:ABB73983.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multi
cn_combo_scaffold_2203_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18046..18450
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB87_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73984.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2203_17
unknown

Not on your lists

comp(18443..18535)
DNA (93bp) protein (31aa)

This feature has no annotations

cn_combo_scaffold_2203_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18834..19613
DNA (780bp) protein (260aa)
Transcriptional regulator-related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB86_NITMU
transcriptional regulator-like protein
Transcriptional regulator-related protein {ECO:0000313|EMBL:ABB73985.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
cn_combo_scaffold_2203_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19849..21393
DNA (1545bp) protein (515aa)
Cytochrome c peroxidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB85_NITMU
cytochrome c peroxidase
Cytochrome c peroxidase {ECO:0000313|EMBL:ABB73986.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2203_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21482..22516
DNA (1035bp) protein (345aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=323848 s
UDP-glucose pyrophosphorylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB84_NITMU
UTP-glucose-1-phosphate uridylyltransferase
cn_combo_scaffold_2203_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22748..23617)
DNA (870bp) protein (290aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00662}; EC=4.1.1.65 {ECO:0000255|HAMAP-Rule:MF_00662};; Contains:; Phosphatidylserine decarboxylase alpha chain {ECO:0000255|HAMAP
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PSD_NITMU
cn_combo_scaffold_2203_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23760..24806)
DNA (1047bp) protein (349aa)
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB82_NITMU
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABB73989.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
Displaying 22 items

View Taxonomy