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cn_combo_scaffold_2227

Alias: NITRO20_39

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2227_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..2049
DNA (2049bp) protein (683aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitro
Error-prone DNA polymerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T5_NITMU
cn_combo_scaffold_2227_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2195..2644
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75887.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2227_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2808..3587
DNA (780bp) protein (260aa)
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G687_ALIDK
4-amino-4-deoxy-L-arabinose transferase-like protein {ECO:0000313|EMBL:GAO26543.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus
4-amino-4-deoxy-L-arabinose transferase-like protein
cn_combo_scaffold_2227_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3584..4459
DNA (876bp) protein (292aa)
4-amino-4-deoxy-L-arabinose transferase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTP7_9BURK
4-amino-4-deoxy-L-arabinose transferase-like protein {ECO:0000313|EMBL:EIK92587.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.
4-amino-4-deoxy-L-arabinose transferase-like protein
cn_combo_scaffold_2227_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5101..5298
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75888.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2227_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5304..5582
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T2_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75889.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2227_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5620..7071
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T1_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75890.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2227_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7142..7576)
DNA (435bp) protein (145aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5T0_NITMU
glutathione-dependent formaldehyde-activating protein
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:ABB75891.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.
cn_combo_scaffold_2227_9
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8117..8821
DNA (705bp) protein (235aa)
Putative uncharacterized protein id=4193807 bin=GWC2_Nitrospirae_57_13 species=Shewanella loihica genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO22901.1}; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella loihica (s
cn_combo_scaffold_2227_10
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8898..9860
DNA (963bp) protein (321aa)
Integrase, catalytic region n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AFA1_NITEC
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABI59981.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas
cn_combo_scaffold_2227_11
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9890..10504
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JPA8_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:KFN39939.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.
hypothetical protein
cn_combo_scaffold_2227_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11042..12505)
DNA (1464bp) protein (488aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000255|HAMAP-Rule:MF_01636}; EC=4.1.1.- {ECO:0000255|HAMAP-Rule:MF_01636};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000255|HAMAP-Rule:MF_016
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UBID_NITMU
carboxylyase-like protein
cn_combo_scaffold_2227_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12558..13427)
DNA (870bp) protein (290aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000255|HAMAP-Rule:MF_01635}; EC=2.5.1.- {ECO:0000255|HAMAP-Rule:MF_01635};; 4-HB polyprenyltransferase {ECO:0000255|HAMAP-Rule:MF_01635}; TaxID=323848 spe
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UBIA_NITMU
ubiA; 4-hydroxybenzoate octaprenyltransferase
cn_combo_scaffold_2227_14
bacterium UASB270, Bacteria

Not on your lists

comp(13879..14610)
DNA (732bp) protein (244aa)
4'-phosphopantetheinyl transferase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYE3_9CYAN
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:GAK60373.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
4'-phosphopantetheinyl transferase
cn_combo_scaffold_2227_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14812..15222)
DNA (411bp) protein (137aa)
Probable chorismate pyruvate-lyase {ECO:0000255|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000255|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000255|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000255|HAMAP-Rule:MF_
Probable chorismate pyruvate-lyase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UBIC_NITMU
chorismate lyase
cn_combo_scaffold_2227_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15486..15839)
DNA (354bp) protein (118aa)
Putative C4-dicarboxylate transporter n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5S1_NITMU
putative C4-dicarboxylate transporter
Putative C4-dicarboxylate transporter {ECO:0000313|EMBL:ABB75900.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
cn_combo_scaffold_2227_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15836..16588)
DNA (753bp) protein (251aa)
Putative C4-dicarboxylate transporter n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5S1_NITMU
putative C4-dicarboxylate transporter
Putative C4-dicarboxylate transporter {ECO:0000313|EMBL:ABB75900.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
cn_combo_scaffold_2227_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16618..17610)
DNA (993bp) protein (331aa)
Transport system permease protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5S0_NITMU
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ABB75901.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospir
cn_combo_scaffold_2227_19
unknown

Not on your lists

comp(17607..17732)
DNA (126bp) protein (42aa)

This feature has no annotations

cn_combo_scaffold_2227_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17805..18467)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase subfamily IB, PSPase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R9_NITMU
HAD family hydrolase
HAD-superfamily hydrolase subfamily IB, PSPase-like protein {ECO:0000313|EMBL:ABB75902.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitr
cn_combo_scaffold_2227_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18464..19138)
DNA (675bp) protein (225aa)
Regulatory inactivation of DnaA Hda protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R8_NITMU
DnaA regulatory inactivator Hda
Regulatory inactivation of DnaA Hda protein {ECO:0000313|EMBL:ABB75903.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
cn_combo_scaffold_2227_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19373..20431
DNA (1059bp) protein (353aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000255|HAMAP-Rule:MF_00741}; EC=6.3.3.1 {ECO:0000255|HAMAP-Rule:MF_00741};; AIR synthase {ECO:0000255|HAMAP-Rule:MF_00741}; AIRS {ECO:0000255|HAMAP
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PUR5_NITMU
cn_combo_scaffold_2227_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20480..21118
DNA (639bp) protein (213aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R6_NITMU
cn_combo_scaffold_2227_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21115..21879
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R5_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75906.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2227_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22097..23335
DNA (1239bp) protein (413aa)
Fmu (Sun) NOL1/Nop2p n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R4_NITMU
Fmu (Sun) NOL1/Nop2p
Fmu (Sun) NOL1/Nop2p {ECO:0000313|EMBL:ABB75907.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="
cn_combo_scaffold_2227_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23332..23925
DNA (594bp) protein (198aa)
Putative endonuclease protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R3_NITMU
putative endonuclease protein
Putative endonuclease protein {ECO:0000313|EMBL:ABB75908.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;"
cn_combo_scaffold_2227_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24059..24589
DNA (531bp) protein (177aa)
MscS Mechanosensitive ion channel n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5R2_NITMU
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABB75909.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
Displaying 27 items

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