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cn_combo_scaffold_2408

Alias: NITRO20_44

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2408_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2..622
DNA (621bp) protein (207aa)
MltA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y686_NITMU
MltA
MltA {ECO:0000313|EMBL:ABB75735.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain AT
cn_combo_scaffold_2408_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(674..1393)
DNA (720bp) protein (240aa)
Putative thiol:disulfide interchange protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y687_NITMU
putative thiol:disulfide interchange protein rbh
Putative thiol:disulfide interchange protein {ECO:0000313|EMBL:ABB75734.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae;
cn_combo_scaffold_2408_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1489..2658)
DNA (1170bp) protein (390aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000313|EMBL:ABB75733.1}; EC=1.14.13.- {ECO:0000313|EMBL:ABB75733.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteri
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y688_NITMU
ubiquinone biosynthesis hydroxylase family protein rbh
cn_combo_scaffold_2408_trna_1
unknown

Not on your lists

2869..2941
DNA (73bp)
transferRNA
cn_combo_scaffold_2408_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3147..3377
DNA (231bp) protein (77aa)
ChaB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y689_NITMU
ChaB
ChaB {ECO:0000313|EMBL:ABB75732.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain AT
cn_combo_scaffold_2408_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3570..4334)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y690_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75731.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2408_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5029..5265)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIY9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62654.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
cn_combo_scaffold_2408_trna_2
unknown

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comp(5401..5484)
DNA (84bp)
transferRNA
cn_combo_scaffold_2408_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5582..6652
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:M
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=QUEA_NITMU
S-adenosylmethionine rbh
cn_combo_scaffold_2408_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6772..7875
DNA (1104bp) protein (368aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000255|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000255|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosy
Queuine tRNA-ribosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TGT_NITMU
cn_combo_scaffold_2408_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7915..8253
DNA (339bp) protein (113aa)
Preprotein translocase subunit YajC (TC 3.A.5.1.1) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLY2_9PROT
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KIO49312.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
preprotein translocase subunit YajC
cn_combo_scaffold_2408_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8323..10167
DNA (1845bp) protein (615aa)
Protein translocase subunit SecD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6A5_NITMU
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
secD; preprotein translocase subunit SecD rbh
cn_combo_scaffold_2408_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10208..11140
DNA (933bp) protein (311aa)
Protein-export membrane protein SecF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6A6_NITMU
secF; preprotein translocase subunit SecF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
cn_combo_scaffold_2408_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11079..11867
DNA (789bp) protein (263aa)
DedA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6A7_NITMU
hypothetical protein rbh
DedA {ECO:0000313|EMBL:ABB75714.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain AT
cn_combo_scaffold_2408_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11961..13073)
DNA (1113bp) protein (371aa)
hemH; ferrochelatase (EC:4.99.1.1) rbh
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6A8_NITMU
cn_combo_scaffold_2408_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13097..14116)
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=HRCA_NITMU
hrcA; heat-inducible transcription repressor rbh
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;"
cn_combo_scaffold_2408_15
unknown

Not on your lists

comp(14126..14269)
DNA (144bp) protein (48aa)

This feature has no annotations

cn_combo_scaffold_2408_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14376..15260
DNA (885bp) protein (295aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23) rbh
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=323848 species="Bacteria; Proteobacteria
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PPNK_NITMU
cn_combo_scaffold_2408_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15277..16968
DNA (1692bp) protein (564aa)
DNA repair protein RecN n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6B1_NITMU
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
DNA repair protein RecN rbh
cn_combo_scaffold_2408_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17113..18006)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6B2_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75709.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2408_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18191..18766)
DNA (576bp) protein (192aa)
GTP cyclohydrolase I (EC:3.5.4.16) rbh
GTP cyclohydrolase 1 {ECO:0000255|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000255|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000255|HAMAP-Rule:MF_00223}; Short=GTP-CH-I {ECO:0000255|HAMAP-Rule:M
GTP cyclohydrolase 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GCH1_NITMU
cn_combo_scaffold_2408_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19030..19863
DNA (834bp) protein (278aa)
exodeoxyribonuclease III (EC:3.1.11.2) rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:ABB75707.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ABB75707.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
Exodeoxyribonuclease III n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6B4_NITMU
cn_combo_scaffold_2408_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19949..20683)
DNA (735bp) protein (245aa)
Transcriptional regulator, LuxR family n=2 Tax=Nitrosospira multiformis RepID=Q2Y6B5_NITMU
LuxR family transcriptional regulator rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABB75706.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="N
cn_combo_scaffold_2408_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21143..22189)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6B6_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75705.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_2408_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22363..22845)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6B7_NITMU
peptidase U62, modulator of DNA gyrase
Uncharacterized protein {ECO:0000313|EMBL:ABB75704.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
Displaying 25 items

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