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cn_combo_scaffold_2553

Alias: NITRO20_47

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2553_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Cell elongation-specific peptidoglycan biosynthesis regulator RodA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC97_NITMU
rod shape-determining protein RodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA {ECO:0000313|EMBL:ABB73624.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
cn_combo_scaffold_2553_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155..2104)
DNA (1950bp) protein (650aa)
Cell elongation-specific peptidoglycan D,D-transpeptidase {ECO:0000313|EMBL:ABB73625.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABB73625.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria;
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Cell elongation-specific peptidoglycan D,D-transpeptidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC96_NITMU
cn_combo_scaffold_2553_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..2622)
DNA (522bp) protein (174aa)
Rod shape-determining protein MreD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC95_NITMU
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:ABB73626.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospi
cn_combo_scaffold_2553_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2619..3512)
DNA (894bp) protein (298aa)
Cell shape-determining protein MreC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC94_NITMU
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betapro
cn_combo_scaffold_2553_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3598..4656)
DNA (1059bp) protein (353aa)
Rod shape-determining protein MreB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC93_NITMU
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:ABB73628.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
cn_combo_scaffold_2553_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4768..5055
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GATC_NITMU
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
cn_combo_scaffold_2553_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5158..6609
DNA (1452bp) protein (484aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=323848
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GATA_NITMU
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
cn_combo_scaffold_2553_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6709..8199
DNA (1491bp) protein (497aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=GATB_NITMU
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
cn_combo_scaffold_2553_9
unknown

Not on your lists

8204..8500
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_2553_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9049..9369
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC89_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73632.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_2553_11
unknown

Not on your lists

comp(9379..9489)
DNA (111bp) protein (37aa)

This feature has no annotations

cn_combo_scaffold_2553_12
unknown

Not on your lists

9790..10068
DNA (279bp) protein (93aa)

This feature has no annotations

cn_combo_scaffold_2553_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10095..10454
DNA (360bp) protein (120aa)
Helix-turn-helix protein, CopG n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC88_NITMU
helix-turn-helix protein, CopG
Helix-turn-helix protein, CopG {ECO:0000313|EMBL:ABB73633.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
cn_combo_scaffold_2553_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10438..10710
DNA (273bp) protein (91aa)
Plasmid stabilization system n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC87_NITMU
plasmid stabilization system protein
Plasmid stabilization system {ECO:0000313|EMBL:ABB73634.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
cn_combo_scaffold_2553_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10867..12204)
DNA (1338bp) protein (446aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ABB73635.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ABB73635.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria;
Peptide methionine sulfoxide reductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC86_NITMU
cn_combo_scaffold_2553_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12835..13602
DNA (768bp) protein (256aa)
Membrane protein-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAS0_NITMU
hypothetical protein rbh
Membrane protein-like protein {ECO:0000313|EMBL:ABB74151.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
cn_combo_scaffold_2553_17
unknown

Not on your lists

13704..13805
DNA (102bp) protein (34aa)

This feature has no annotations

cn_combo_scaffold_2553_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13800..14555)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037E87DA
phospholipase D
Uncharacterized protein {ECO:0000313|EMBL:AFN77007.1}; TaxID=1123519 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
cn_combo_scaffold_2553_19
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14512..15276)
DNA (765bp) protein (255aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2Y7_NITHN
phospholipase D/transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ADE14879.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;
cn_combo_scaffold_2553_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15610..18498)
DNA (2889bp) protein (963aa)
Ca ion P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFQ7_9PROT
Ca ion P-type ATPase {ECO:0000313|EMBL:CCU61122.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus
E1-E2 type ATPase
cn_combo_scaffold_2553_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18667..18945)
DNA (279bp) protein (93aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003720BD4
Membrane protein {ECO:0000313|EMBL:KIO49851.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
cn_combo_scaffold_2553_22
unknown

Not on your lists

19373..19705
DNA (333bp) protein (111aa)

This feature has no annotations

cn_combo_scaffold_2553_23
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19868..20440
DNA (573bp) protein (191aa)
NADPH-dependent FMN reductase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B08B5
Uncharacterized protein {ECO:0000313|EMBL:GAO01658.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
NADPH-dependent FMN reductase
cn_combo_scaffold_2553_24
Halomonas meridiana, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20665..21072)
DNA (408bp) protein (136aa)
Aldo/keto reductase n=2 Tax=Alteromonadaceae RepID=F5Z754_ALTSS
aldo/keto reductase
Alcohol dehydrogenase {ECO:0000313|EMBL:KJD20115.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;"
cn_combo_scaffold_2553_25
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21021..21629)
DNA (609bp) protein (203aa)
Aldo/keto reductase n=2 Tax=Alteromonadaceae RepID=F5Z754_ALTSS
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEF05717.1}; TaxID=715451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas sp. (strai
Displaying 25 items

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