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cn_combo_scaffold_3198

Alias: NITRO20_63

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3198_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..204)
DNA (204bp) protein (68aa)
30S ribosomal protein S1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A8_NITMU
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
cn_combo_scaffold_3198_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(574..1263)
DNA (690bp) protein (230aa)
cytidylate kinase (EC:2.7.4.14) rbh
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A7_NITMU
cn_combo_scaffold_3198_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1260..2624)
DNA (1365bp) protein (455aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Nitrosospira multiformis RepID=UPI0001A230BF
cn_combo_scaffold_3198_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2800..3753
DNA (954bp) protein (318aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
Cysteine synthase A n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A5_NITMU
cysteine synthase A rbh
cn_combo_scaffold_3198_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3787..4719
DNA (933bp) protein (311aa)
Serine O-acetyltransferase (EC:2.3.1.30) rbh
Serine O-acetyltransferase {ECO:0000313|EMBL:ABB75367.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABB75367.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonad
Serine O-acetyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A4_NITMU
cn_combo_scaffold_3198_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4989..5879
DNA (891bp) protein (297aa)
Sel1-like repeat n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A3_NITMU
Sel1 repeat-containing protein rbh
Sel1-like repeat {ECO:0000313|EMBL:ABB75368.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformi
cn_combo_scaffold_3198_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5961..7463
DNA (1503bp) protein (501aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4) rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A2_NITMU
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABB75369.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
cn_combo_scaffold_3198_8
unknown

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7463..7627
DNA (165bp) protein (55aa)

This feature has no annotations

cn_combo_scaffold_3198_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7627..8109
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A1_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75370.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_3198_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8112..8501
DNA (390bp) protein (130aa)
Invasion gene expression up-regulator, SirB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7A0_NITMU
invasion gene expression up-regulator SirB
Invasion gene expression up-regulator, SirB {ECO:0000313|EMBL:ABB75371.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
cn_combo_scaffold_3198_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8656..10989
DNA (2334bp) protein (778aa)
penicillin-binding protein 1A (EC:2.4.1.129) rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABB75372.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABB75372.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitroso
Penicillin-binding protein 1A n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y799_NITMU
cn_combo_scaffold_3198_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11057..12019)
DNA (963bp) protein (321aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadale
Delta-aminolevulinic acid dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y798_NITMU
cn_combo_scaffold_3198_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12198..12944)
DNA (747bp) protein (249aa)
Probable GTP-binding protein EngB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ENGB_NITMU
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
cn_combo_scaffold_3198_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12978..13766)
DNA (789bp) protein (263aa)
pantothenate kinase (EC:2.7.1.33) rbh
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-R
Type III pantothenate kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=COAX_NITMU
cn_combo_scaffold_3198_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13767..14777)
DNA (1011bp) protein (337aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15) rbh
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y795_NITMU
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
cn_combo_scaffold_3198_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15019..16716
DNA (1698bp) protein (566aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glutaminyl-tRNA synthetase (EC:6.1.1.18) rbh
glutaminyl-tRNA synthetase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UPI0001611A3F
cn_combo_scaffold_3198_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17057..17380
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y793_NITMU
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (
cn_combo_scaffold_3198_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17537..17851
DNA (315bp) protein (105aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=323848 specie
Transcription termination factor Rho n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKG8_9PROT
rho; transcription termination factor Rho
Displaying 18 items

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