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cn_combo_scaffold_3287

Alias: NITRO20_69

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3287_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..2772)
DNA (2772bp) protein (924aa)
LPS-assembly protein LptD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LPTD_NITMU
organic solvent tolerance protein
LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;"
cn_combo_scaffold_3287_2
unknown

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2818..3135
DNA (318bp) protein (106aa)
hypothetical protein
cn_combo_scaffold_3287_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3198..4532
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramate n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBP0_NITMU
UDP-N-acetylmuramate
UDP-N-acetylmuramate {ECO:0000313|EMBL:ABB73831.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="
cn_combo_scaffold_3287_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4598..5014)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBN9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73832.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_3287_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5523..5945)
DNA (423bp) protein (141aa)
Putative transposase for insertion sequence element n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS20_9SPHN
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAK68575.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
cn_combo_scaffold_3287_6
Komagataeibacter intermedius, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6048..6515)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002FA66C8
Putative transposase {ECO:0000313|EMBL:KIE61214.1}; TaxID=1458464 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibact
putative transposase
cn_combo_scaffold_3287_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6670..7794
DNA (1125bp) protein (375aa)
Probable transmembrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH8_9PROT
Probable transmembrane protein {ECO:0000313|EMBL:CCU63369.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
transmembrane protein
cn_combo_scaffold_3287_8
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7986..8459)
DNA (474bp) protein (158aa)
ISRm2011-2 transposase protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AGM4_NITEC
ISRm2011-2 transposase protein
ISRm2011-2 transposase protein {ECO:0000313|EMBL:ABI59508.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo
cn_combo_scaffold_3287_9
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8492..8929)
DNA (438bp) protein (146aa)
UPI0003CFD430 related cluster n=1 Tax=unknown RepID=UPI0003CFD430
Endonuclease DDE {ECO:0000313|EMBL:ESZ49319.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C5
putative IS630 family transposase, OrfC
cn_combo_scaffold_3287_10
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9107..9748)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F602BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF73372.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornit
cn_combo_scaffold_3287_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9905..11242)
DNA (1338bp) protein (446aa)
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI00036158E8
ATPase AAA {ECO:0000313|EMBL:KJC62240.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
Fis family two component sigma-54 specific transcriptional regulator
cn_combo_scaffold_3287_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11227..12279)
DNA (1053bp) protein (351aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
histidine kinase n=1 Tax=Nevskia ramosa RepID=UPI0003B37460
integral membrane sensor signal transduction histidine kinase
cn_combo_scaffold_3287_13
unknown

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comp(12383..12679)
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_3287_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13371..15356)
DNA (1986bp) protein (662aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBN8_NITMU
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABB73833.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="
cn_combo_scaffold_3287_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15525..17414)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBN7_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73834.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
Displaying 15 items

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