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cn_combo_scaffold_3759

Alias: NITRO20_96

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3759_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3..554
DNA (552bp) protein (184aa)
Amine oxidase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD24_NITMU
amine oxidase
Amine oxidase {ECO:0000313|EMBL:ABB73347.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (
cn_combo_scaffold_3759_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(879..1877)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FBE0A
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36255.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
patatin rbh
cn_combo_scaffold_3759_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2864..3067
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T3_NITMU
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABB75538.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
cn_combo_scaffold_3759_4
unknown

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comp(3070..3192)
DNA (123bp) protein (41aa)

This feature has no annotations

cn_combo_scaffold_3759_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3715..6891)
DNA (3177bp) protein (1059aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HJU2_9BURK
Transporter {ECO:0000313|EMBL:KIO48145.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RND transporter, hydrophobe/amphiphile efflux-1 family protein
cn_combo_scaffold_3759_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6913..8031)
DNA (1119bp) protein (373aa)
Multidrug efflux transporter, membrane fusion protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHC3_9BACT
Acriflavin resistance protein AcrA {ECO:0000313|EMBL:KIO48253.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
multidrug efflux transporter, membrane fusion protein
cn_combo_scaffold_3759_7
unknown

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8172..8267
DNA (96bp) protein (32aa)

This feature has no annotations

cn_combo_scaffold_3759_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8246..8506)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPL6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61405.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
Tfp pilus assembly protein PilF
cn_combo_scaffold_3759_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8643..9689
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC9_9PROT
WGS project CAUA00000000 data, contig 1 {ECO:0000313|EMBL:CCU60989.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
hypothetical protein
cn_combo_scaffold_3759_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10072..10260
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW3_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73408.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_3759_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10356..11558)
DNA (1203bp) protein (401aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ABB73407.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABB73407.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomon
Acetyl-CoA C-acyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW4_NITMU
cn_combo_scaffold_3759_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..14274)
DNA (2553bp) protein (851aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABB73406.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABB73406.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitros
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW5_NITMU
3-hydroxyacyl-CoA dehydrogenase
cn_combo_scaffold_3759_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14302..14721)
DNA (420bp) protein (140aa)
Thioesterase superfamily n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW6_NITMU
thioesterase superfamily protein
Thioesterase superfamily {ECO:0000313|EMBL:ABB73405.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mu
cn_combo_scaffold_3759_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14752..15336)
DNA (585bp) protein (195aa)
AMP-dependent synthetase and ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCW7_NITMU
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB73404.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitr
cn_combo_scaffold_3759_15
unknown

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15569..15928
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 15 items

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