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cn_combo_scaffold_4368

Alias: NITRO20_116

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4368_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..440)
DNA (438bp) protein (146aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X8_NITMU
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABB75143.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
cn_combo_scaffold_4368_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(532..1449)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X7_NITMU
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75144.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_4368_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1679..2719
DNA (1041bp) protein (347aa)
Succinyldiaminopimelate aminotransferase apoenzyme {ECO:0000313|EMBL:ABB75145.1}; EC=2.6.1.17 {ECO:0000313|EMBL:ABB75145.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitros
Succinyldiaminopimelate aminotransferase apoenzyme n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X6_NITMU
succinyldiaminopimelate transaminase
cn_combo_scaffold_4368_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2770..3591
DNA (822bp) protein (274aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000255|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000255|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DAPD_NITMU
cn_combo_scaffold_4368_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3651..4811
DNA (1161bp) protein (387aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690}; Short=SDAP desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000255|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6
Succinyl-diaminopimelate desuccinylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=DAPE_NITMU
succinyl-diaminopimelate desuccinylase
cn_combo_scaffold_4368_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4816..5724
DNA (909bp) protein (303aa)
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X2_NITMU
cn_combo_scaffold_4368_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5721..6392)
DNA (672bp) protein (224aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonad
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X1_NITMU
pseudouridine synthase Rsu
cn_combo_scaffold_4368_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6909..7508)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RECR_NITMU
recR; recombination protein RecR rbh
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrososp
cn_combo_scaffold_4368_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7571..7897)
DNA (327bp) protein (109aa)
Nucleoid-associated protein Nmul_A1857 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W9_NITMU
hypothetical protein
Nucleoid-associated protein Nmul_A1857 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
cn_combo_scaffold_4368_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7909..9684)
DNA (1776bp) protein (592aa)
DNA-directed DNA polymerase (EC:2.7.7.7) rbh
DNA polymerase III, tau subunit {ECO:0000313|EMBL:ABB75153.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABB75153.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosom
DNA polymerase III, tau subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W8_NITMU
cn_combo_scaffold_4368_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10353..10751)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W7_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75154.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_4368_trna_1
unknown

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comp(11583..11656)
DNA (74bp)
transferRNA
cn_combo_scaffold_4368_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12041..12979
DNA (939bp) protein (313aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W6_NITMU
diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ABB75155.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitros
cn_combo_scaffold_4368_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13204..13389
DNA (186bp) protein (62aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W5_NITMU
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABB75156.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
Displaying 14 items

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