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CN-SCN_Nitrosomonadales_20x

CN-SCN_Nitrosospira_multiformis_54_21
In projects: CN-SCN

Consensus taxonomy: Nitrosospira multiformis  →  Nitrosospira  →  Nitrosomonadales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 20.77 Longest contig: 87.46 Kbp Bin length: 5.00 Mbp GC content: 54.19 %
Contigs count: 379 Features count: 4868 rRNAs count: 0 tRNAs count: 38

Genome completeness

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8

Description

Partial double 47

Displaying items 101-150 of 379 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_2245 NITRO20_40
Species: Nitrosospira multiformis (56.52%)
23 24352 bp 50.97 18.48 90.26
cn_combo_scaffold_5991 NITRO20_178
Species: Nitrosospira multiformis (90.91%)
11 10007 bp 52.01 12.51 90.19
cn_combo_scaffold_2184 NITRO20_33
Species: Nitrosospira multiformis (82.35%)
17 25014 bp 55.10 22.90 90.18
cn_combo_scaffold_3797 NITRO20_102
Species: Nitrosospira multiformis (54.55%)
11 15240 bp 55.09 15.50 90.18
cn_combo_scaffold_6396 NITRO20_201
Species: Nitrosospira multiformis (85.71%)
7 9446 bp 54.67 19.52 90.13
cn_combo_scaffold_5314 NITRO20_155
Species: Nitrosospira multiformis (90%)
20 19032 bp 56.91 24.03 90.13
cn_combo_scaffold_3183 NITRO20_64
Species: Nitrosospira multiformis (83.33%)
30 29988 bp 54.74 23.97 90.13
cn_combo_scaffold_11711 NITRO20_339
Species: Nitrosospira multiformis (66.67%)
3 5436 bp 55.94 22.39 90.12
cn_combo_scaffold_2049 NITRO20_29
Species: Nitrosospira multiformis (100%)
24 27007 bp 55.30 25.27 90.12
cn_combo_scaffold_5039 NITRO20_142
Species: Nitrosospira multiformis (91.67%)
12 12272 bp 55.57 27.04 90.03
cn_combo_scaffold_1938 NITRO20_24
Species: Nitrosospira multiformis (79.17%)
24 28093 bp 54.21 22.03 90.03
cn_combo_scaffold_1995 NITRO20_26
Species: Nitrosospira multiformis (87.5%)
24 27393 bp 54.50 19.10 89.98
cn_combo_scaffold_2443 NITRO20_45
Species: Nitrosospira multiformis (89.47%)
19 22560 bp 53.83 18.87 89.94
cn_combo_scaffold_6944 NITRO20_219
Species: Nitrosospira multiformis (80%)
10 8791 bp 55.41 25.59 89.92
cn_combo_scaffold_7467 NITRO20_231
Species: Nitrosospira multiformis (100%)
7 8250 bp 55.22 20.93 89.89
cn_combo_scaffold_12449 NITRO20_351
Species: Nitrosomonas europaea (100%)
4 5143 bp 52.87 7.76 89.89
cn_combo_scaffold_5589 NITRO20_162
Species: Nitrosospira multiformis (100%)
12 10673 bp 54.88 21.82 89.81
cn_combo_scaffold_7550 NITRO20_235
Species: Nitrosospira multiformis (100%)
9 8158 bp 54.13 16.14 89.73
cn_combo_scaffold_5424 NITRO20_159
Species: Nitrosospira multiformis (80%)
15 10942 bp 52.79 16.84 89.71
cn_combo_scaffold_2803 NITRO20_53
Species: Nitrosospira multiformis (73.68%)
19 20444 bp 54.79 20.62 89.64
cn_combo_scaffold_5306 NITRO20_154
Species: Nitrosospira multiformis (90%)
10 11144 bp 53.31 12.18 89.56
cn_combo_scaffold_4416 NITRO20_120
Species: Nitrosospira multiformis (93.75%)
16 13285 bp 53.87 22.24 89.54
cn_combo_scaffold_6262 NITRO20_195
Species: Nitrosospira multiformis (90%)
10 9616 bp 53.89 13.79 89.51
cn_combo_scaffold_1564 NITRO20_11
Species: Nitrosospira multiformis (87.1%)
31 33125 bp 54.19 18.63 89.51
cn_combo_scaffold_3481 NITRO20_77
Species: Nitrosospira multiformis (93.75%)
16 16511 bp 57.48 28.99 89.50
cn_combo_scaffold_6215 NITRO20_189
Species: Nitrosospira multiformis (100%)
6 9697 bp 55.36 19.95 89.50
cn_combo_scaffold_3806 NITRO20_103
Species: Nitrosospira multiformis (94.44%)
18 15215 bp 54.71 24.44 89.50
cn_combo_scaffold_7243 NITRO20_223
Species: Nitrosospira multiformis (88.89%)
9 8457 bp 52.87 9.71 89.46
cn_combo_scaffold_7426 NITRO20_229
Species: Nitrosospira multiformis (100%)
7 8284 bp 53.67 20.26 89.41
cn_combo_scaffold_5302 NITRO20_153
Species: Nitrosospira multiformis (50%)
10 11149 bp 51.66 15.11 89.39
cn_combo_scaffold_2020 NITRO20_27
Species: Nitrosospira multiformis (88.89%)
18 27064 bp 54.39 19.11 89.35
cn_combo_scaffold_4878 NITRO20_134
Species: Nitrosospira multiformis (100%)
5 12060 bp 54.85 15.02 89.35
cn_combo_scaffold_3793 NITRO20_101
Species: Nitrosospira multiformis (90.91%)
11 15247 bp 56.51 25.10 89.19
cn_combo_scaffold_2183 NITRO20_32
Species: Nitrosospira multiformis (100%)
15 25015 bp 56.92 24.26 89.17
cn_combo_scaffold_9702 NITRO20_291
Species: Nitrosospira multiformis (71.43%)
7 6495 bp 57.09 29.50 89.07
cn_combo_scaffold_1328 NITRO20_8
Species: Nitrosospira multiformis (97.06%)
34 38519 bp 55.56 20.14 89.05
cn_combo_scaffold_7355 NITRO20_224
Species: Nitrosospira multiformis (100%)
9 8344 bp 53.50 19.52 89.02
cn_combo_scaffold_9418 NITRO20_284
Species: Nitrosospira multiformis (100%)
7 6669 bp 55.29 19.00 88.93
cn_combo_scaffold_2849 NITRO20_55
Species: Nitrosospira multiformis (85.71%)
14 19787 bp 53.70 16.40 88.92
cn_combo_scaffold_6634 NITRO20_208
Species: Nitrosospira multiformis (90.91%)
11 9149 bp 53.05 19.67 88.73
cn_combo_scaffold_860 NITRO20_1
Species: Nitrosospira multiformis (94%)
50 54415 bp 56.05 26.59 88.70
cn_combo_scaffold_7924 NITRO20_370
Phylum: Proteobacteria (50%)
12 7822 bp 49.82 12.53 88.66
cn_combo_scaffold_6106 NITRO20_183
Species: Nitrosospira multiformis (100%)
12 9869 bp 54.46 20.63 88.64
cn_combo_scaffold_9848 NITRO20_297
Species: Nitrosospira multiformis (100%)
5 6409 bp 54.69 15.15 88.61
cn_combo_scaffold_6240 NITRO20_192
Species: Nitrosospira multiformis (100%)
8 9653 bp 55.30 23.24 88.60
cn_combo_scaffold_5420 NITRO20_158
Species: Nitrosospira multiformis (72.73%)
11 10944 bp 55.46 20.00 88.60
cn_combo_scaffold_939 NITRO20_3
Species: Nitrosospira multiformis (51.25%)
80 87463 bp 55.91 25.83 88.51
cn_combo_scaffold_10920 NITRO20_324
Species: Nitrosospira multiformis (100%)
5 5803 bp 54.71 15.60 88.51
cn_combo_scaffold_2424 NITRO20_362a
Order: Nitrosomonadales (57.14%)
21 26047 bp 55.52 21.42 88.50
cn_combo_scaffold_6828 NITRO20_213
Species: Nitrosospira multiformis (100%)
10 8928 bp 53.30 17.34 88.47
Displaying items 101-150 of 379 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.