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gwa2_scaffold_2552

Alias: GWA2_OD1_40_14_5

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_2552_1

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2..2857
-----------------
DNA (2856bp)
protein (952aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45776.1}; Flags: Fragment;; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_2552_2

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2945..3325
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45777.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
gwa2_scaffold_2552_3

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3461..4831
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45778.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
cell wall surface anchor family protein
Putative uncharacterized protein
gwa2_scaffold_2552_4

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7200..8048
-----------------
DNA (849bp)
protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31542.1}; Flags: Fragment;; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
hypothetical protein
Conserved protein
gwa2_scaffold_2552_5

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8069..9748
-----------------
DNA (1680bp)
protein (560aa)
Integral membrane protein MviN {ECO:0000313|EMBL:KKR31543.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
putative peptidoglycan lipid II flippase MurJ
Integral membrane protein MviN
gwa2_scaffold_2552_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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9806..10507
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
Uncharacterized protein
gwa2_scaffold_2552_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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10579..12414
-----------------
DNA (1836bp)
protein (612aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
GTP-binding protein LepA
Elongation factor 4
gwa2_scaffold_2552_8

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comp(12707..13279)
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31546.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
phaN; repressor
ORF13
gwa2_scaffold_2552_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(13472..13969)
-----------------
DNA (498bp)
protein (166aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ruvC; crossover junction endodeoxyribonuclease RuvC
Crossover junction endodeoxyribonuclease RuvC
gwa2_scaffold_2552_10

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comp(14120..14650)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31548.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
transcriptional regulator
Probable transcriptional regulatory protein OpiT1DRAFT_04674
gwa2_scaffold_2552_11
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(14700..15710)
-----------------
DNA (1011bp)
protein (337aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Holliday junction DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase RuvB
gwa2_scaffold_2552_12

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comp(16033..17709)
-----------------
DNA (1677bp)
protein (559aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45787.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
pilB1; type IV-A pilus assembly ATPase PilB
Putative type II secretion system protein E
gwa2_scaffold_2552_13

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17836..18429
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45788.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
gwa2_scaffold_2552_14
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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18502..18984
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Nucleotide-binding protein
Uncharacterized protein family UPF0079, ATPase
gwa2_scaffold_2552_15

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19045..21414
-----------------
DNA (2370bp)
protein (790aa)
polA; DNA polymerase I (EC:2.7.7.7)
Polymerase protein {ECO:0000313|EMBL:KKR31553.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
DNA polymerase
gwa2_scaffold_2552_16

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21371..22135
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45791.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
gwa2_scaffold_2552_17

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comp(22330..22737)
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45792.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
gwa2_scaffold_2552_18

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22818..23297
-----------------
DNA (480bp)
protein (160aa)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:KKR45793.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU)
gwa2_scaffold_2552_19

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comp(23382..24245)
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45794.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
gwa2_scaffold_2552_20

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comp(24274..25209)
-----------------
DNA (936bp)
protein (312aa)
fomramidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:KKR45795.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Formamidopyrimidine-DNA glycosylase
gwa2_scaffold_2552_21
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(25310..25897)
-----------------
DNA (588bp)
protein (196aa)
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA
gwa2_scaffold_2552_22
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


25950..26213
-----------------
DNA (264bp)
protein (88aa)
rpsT; ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
rpsT; ribosomal protein S20
30S ribosomal protein S20
gwa2_scaffold_2552_23

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comp(26381..26842)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45798.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Putative uncharacterized protein
gwa2_scaffold_2552_24

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comp(26847..27290)
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45799.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_2552_25
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

27332..27769
-----------------
DNA (438bp)
protein (146aa)
plastocyanin Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Blue (Type 1) copper protein
Plastocyanin
gwa2_scaffold_2552_26

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28262..28654
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31518.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
ruvX; Holliday junction resolvase YqgF
Putative Holliday junction resolvase
gwa2_scaffold_2552_27
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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28668..29636
-----------------
DNA (969bp)
protein (323aa)
pilM; type 4 fimbrial biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Type IV pilus assembly protein PilM
gwa2_scaffold_2552_28
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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29658..30194
-----------------
DNA (537bp)
protein (179aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
gwa2_scaffold_2552_29
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

30191..30754
-----------------
DNA (564bp)
protein (188aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
gwa2_scaffold_2552_30
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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30756..31091
-----------------
DNA (336bp)
protein (112aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Displaying items 1-30 of 43 in total

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