ggKbase home page

GWB1_scaffold_2730

Alias: GWB1_WWE3_42_41_10

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_scaffold_2730_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

68..988
DNA (921bp) protein (307aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKS03482.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha
GWB1_scaffold_2730_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


1006..1440
DNA (435bp) protein (145aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17
GWB1_scaffold_2730_3
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


1447..1869
DNA (423bp) protein (141aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplM; 50S ribosomal protein L13
50S ribosomal protein L13
GWB1_scaffold_2730_4
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


1872..2306
DNA (435bp) protein (145aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS03485.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
30S ribosomal protein S9
GWB1_scaffold_2730_5
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(2303..2578)
DNA (276bp) protein (92aa)
lambda repressor-like DNA-binding domains 1..66 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
DNA-binding helix-turn-helix protein
GWB1_scaffold_2730_6

Not on your lists

2641..3330
DNA (690bp) protein (230aa)
DNA repair protein RadC {ECO:0000313|EMBL:EKD85827.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
radC; DNA repair protein RadC
UPF0758 protein NT01CX_1687
GWB1_scaffold_2730_7
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

3327..3914
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03488.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
GWB1_scaffold_2730_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3938..4378
DNA (441bp) protein (147aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Signal sequence peptidase
GWB1_scaffold_2730_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

4391..6955
DNA (2565bp) protein (855aa)
CLPC2; chaperone, Hsp100 family, ClpC-type; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Chaperone, Hsp100 family, ClpC-type
GWB1_scaffold_2730_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

6984..7991
DNA (1008bp) protein (336aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Peptide chain release factor 2
GWB1_scaffold_2730_11
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(7992..8246)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03492.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
GWB1_scaffold_2730_12
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(8269..10521)
DNA (2253bp) protein (751aa)
FtsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Cell divisionFtsK/SpoIIIE
GWB1_scaffold_2730_13
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(10605..12329)
DNA (1725bp) protein (575aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Metallo-beta-lactamase
GWB1_scaffold_2730_14
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(12339..12968)
DNA (630bp) protein (210aa)
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:KKS03495.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Phage SPO1 DNA polymerase-related protein
GWB1_scaffold_2730_15
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(12970..14043)
DNA (1074bp) protein (358aa)
Lon protease {ECO:0000313|EMBL:KKS03496.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Lon protease
GWB1_scaffold_2730_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(14036..14959)
DNA (924bp) protein (308aa)
transmembrane_regions 55..77 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
GWB1_scaffold_2730_17
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(14995..17049)
DNA (2055bp) protein (685aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKS03498.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Polyribonucleotide nucleotidyltransferase
GWB1_scaffold_2730_18
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


comp(17188..17457)
DNA (270bp) protein (90aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
30S ribosomal protein S15
GWB1_scaffold_2730_19
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(17514..18152)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
GWB1_scaffold_2730_20
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(18270..19766)
DNA (1497bp) protein (499aa)
Translation initiation factor IF-2 {ECO:0000313|EMBL:KKS03501.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Translation initiation factor IF-2
GWB1_scaffold_2730_21
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(19813..21006)
DNA (1194bp) protein (398aa)
NusA antitermination factor {ECO:0000313|EMBL:KKS03502.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
NusA antitermination factor
GWB1_scaffold_2730_22
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(21124..22062)
DNA (939bp) protein (313aa)
Chaperone DnaJ {ECO:0000313|EMBL:KKS03503.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
molecular chaperone DnaJ
Chaperone DnaJ
Displaying 22 items

View Taxonomy