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This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwc2_scaffold_1029

Alias: GWC2_OP11_ACD12-rel_34_23_1

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_1029_1
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1..84)
-----------------
DNA (84bp)
protein (28aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP63024.1}; Flags: Fragment;; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
gwc2_scaffold_1029_2
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

218..1267
-----------------
DNA (1050bp)
protein (350aa)
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:KKP63025.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator
gwc2_scaffold_1029_3
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1238..1894)
-----------------
DNA (657bp)
protein (219aa)
Alginate lyase 2 {ECO:0000313|EMBL:KKP52734.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
Alginate lyase 2
gwc2_scaffold_1029_4
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1920..3227)
-----------------
DNA (1308bp)
protein (436aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52735.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
Putative lipoprotein
gwc2_scaffold_1029_5
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3230..3415)
-----------------
DNA (186bp)
protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP63028.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
gwc2_scaffold_1029_6
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3412..3981)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52737.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
gwc2_scaffold_1029_7
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3988..4515)
-----------------
DNA (528bp)
protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52738.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
gwc2_scaffold_1029_8
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(4512..4760)
-----------------
DNA (249bp)
protein (83aa)
30S ribosomal protein S20 {ECO:0000313|EMBL:KKP52739.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
30S ribosomal protein S20
gwc2_scaffold_1029_9
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4876..5337)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP63032.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
gwc2_scaffold_1029_10
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(5352..6707)
-----------------
DNA (1356bp)
protein (452aa)
Glycine-tRNA ligase {ECO:0000313|EMBL:KKP63033.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
glycyl-tRNA synthetase
Glycine--tRNA ligase
gwc2_scaffold_1029_11
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6804..7328)
-----------------
DNA (525bp)
protein (175aa)
Repair protein RecO protein {ECO:0000313|EMBL:KKP63034.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
RecO; recombinational DNA repair protein
DNA repair protein RecO
gwc2_scaffold_1029_12
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7352..8011)
-----------------
DNA (660bp)
protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52743.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
gwc2_scaffold_1029_13
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8165..8389)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52744.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
Putative uncharacterized protein
gwc2_scaffold_1029_14
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8386..8655)
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52745.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
gwc2_scaffold_1029_15
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8676..10496)
-----------------
DNA (1821bp)
protein (607aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP63038.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
hypothetical protein
Putative uncharacterized protein
gwc2_scaffold_1029_16
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10504..11145)
-----------------
DNA (642bp)
protein (214aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:KKP63039.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_
Undecaprenyl-phosphate galactose phosphotransferase
gwc2_scaffold_1029_17
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11142..12230)
-----------------
DNA (1089bp)
protein (363aa)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KKP63040.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
mannose-1-phosphate guanylyltransferase (GDP)
Mannose-1-phosphate guanylyltransferase
gwc2_scaffold_1029_18
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12356..13402)
-----------------
DNA (1047bp)
protein (349aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKP63041.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
Glycosyltransferase
Glycosyl transferase group 1
gwc2_scaffold_1029_19
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

13594..14223
-----------------
DNA (630bp)
protein (210aa)
Restriction endonuclease {ECO:0000313|EMBL:KKP63042.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
restriction endonuclease
Restriction endonuclease
gwc2_scaffold_1029_20
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14261..14950)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52751.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
gwc2_scaffold_1029_21
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15130..15576)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP63044.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
gwc2_scaffold_1029_22
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15739..16827)
-----------------
DNA (1089bp)
protein (363aa)
Glycosyl transferase, group 1 {ECO:0000313|EMBL:KKP63045.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
glycosyl transferase, group 1
glycosyl transferase, group 1
gwc2_scaffold_1029_23
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(16824..17708)
-----------------
DNA (885bp)
protein (295aa)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KKP63046.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
glycosyl transferase family protein
Glycosyl transferase, family 2
gwc2_scaffold_1029_24
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(17724..18179)
-----------------
DNA (456bp)
protein (152aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKP63047.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9
gwc2_scaffold_1029_25
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(18238..18669)
-----------------
DNA (432bp)
protein (144aa)
50S ribosomal protein L13 {ECO:0000313|EMBL:KKP63048.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
rplM; 50S ribosomal protein L13
50S ribosomal protein L13
gwc2_scaffold_1029_26
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(18666..19043)
-----------------
DNA (378bp)
protein (126aa)
50S ribosomal protein L17 {ECO:0000313|EMBL:KKP63049.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
50S ribosomal protein L17
50S ribosomal protein L17
gwc2_scaffold_1029_27
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(19046..19969)
-----------------
DNA (924bp)
protein (308aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKP63050.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha
gwc2_scaffold_1029_28
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(20008..20628)
-----------------
DNA (621bp)
protein (207aa)
30S ribosomal protein S4 {ECO:0000313|EMBL:KKP63051.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
30S ribosomal protein S4
30S ribosomal protein S4
gwc2_scaffold_1029_29
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(20673..21047)
-----------------
DNA (375bp)
protein (125aa)
SSU ribosomal protein S11P {ECO:0000313|EMBL:KKP63052.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
30S ribosomal protein S11
SSU ribosomal protein S11P
gwc2_scaffold_1029_30
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(21061..21483)
-----------------
DNA (423bp)
protein (141aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKP63053.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13
Displaying items 1-30 of 106 in total

View Taxonomy