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gwf2_scaffold_4293

Alias: GWF2_OD1_35_66_11

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_4293_1
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(1..276)
-----------------
DNA (276bp)
protein (92aa)
Peptidoglycan-binding domain 1 protein Tax=GWF2_OD1_38_76
gwf2_scaffold_4293_2

Not on your lists

comp(649..1254)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT10025.1}; TaxID=1618786 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_43_21.;"
gwf2_scaffold_4293_3
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1276..2706)
-----------------
DNA (1431bp)
protein (477aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A
gwf2_scaffold_4293_4
RIFOXYD2_FULL_OD1_44_9_curated, Parcubacteria, Bacteria

Not on your lists

comp(2719..3015)
-----------------
DNA (297bp)
protein (99aa)
aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYD2_FULL_OD1_44_9_curated
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
gwf2_scaffold_4293_5
GWD1_OD1_35_49, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3128..5161)
-----------------
DNA (2034bp)
protein (678aa)
Ligase protein {ECO:0000313|EMBL:KKP79137.1}; TaxID=1618631 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWD1_35_49.;"
DNA ligase
DNA ligase
gwf2_scaffold_4293_6

Not on your lists

comp(5275..5568)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD24423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
excinuclease ABC C subunit domain-containing protein
Excinuclease ABC C subunit domain protein
gwf2_scaffold_4293_7
R_OD1_Nomurabacteria_42_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5701..6285)
-----------------
DNA (585bp)
protein (195aa)
F5/8 type C domain protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_42_19_curated
gwf2_scaffold_4293_8
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(6290..7057)
-----------------
DNA (768bp)
protein (256aa)
seg Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
gwf2_scaffold_4293_9
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(7064..7786)
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_52_8_curated
gwf2_scaffold_4293_10
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(7813..8643)
-----------------
DNA (831bp)
protein (277aa)
transmembrane_regions Tax=RIFOXYD2_FULL_OD1_52_8_curated
Protein containing Prepilin-type cleavage/methylation, N-terminal domain (Fragment)
gwf2_scaffold_4293_11
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(8646..9536)
-----------------
DNA (891bp)
protein (297aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFOXYD2_FULL_OD1_52_8_curated
peptidase A24A domain-containing protein
Type 4 prepilin-like proteins leader peptide-processing enzyme
gwf2_scaffold_4293_12
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

9553..10209
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
hypothetical protein
Transposase
gwf2_scaffold_4293_13

Not on your lists

comp(10317..10763)
-----------------
DNA (447bp)
protein (149aa)
Type II secretion system protein G {ECO:0000313|EMBL:KKT26477.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
PilE-like protein
Putative general secretion pathway protein G
gwf2_scaffold_4293_14
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(10809..11330)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
type IV pilin PilA-like protein
Type IV pilin PilA homolog
gwf2_scaffold_4293_15
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(11923..13128)
-----------------
DNA (1206bp)
protein (402aa)
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC Tax=RIFOXYD2_FULL_OD1_52_8_curated
Type II secretion system F domain
Type II secretion system F domain
gwf2_scaffold_4293_16
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists

comp(13255..14319)
-----------------
DNA (1065bp)
protein (355aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFOXYD1_FULL_OD1_44_32_curated
pilT; twitching motility protein
twitching motility protein
gwf2_scaffold_4293_17
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(14511..16094)
-----------------
DNA (1584bp)
protein (528aa)
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFOXYD1_FULL_OD1_46_19_curated
Tfp pilus assembly protein PilB
Tfp pilus assembly protein PilB
gwf2_scaffold_4293_18
R_OD1_Yanofskybacteria_44_12, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16294..16689)
-----------------
DNA (396bp)
protein (132aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_44_12_curated
gwf2_scaffold_4293_19
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(16689..17225)
-----------------
DNA (537bp)
protein (179aa)
no description Tax=RIFOXYD2_FULL_OD1_52_8_curated
gwf2_scaffold_4293_20
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(17233..17868)
-----------------
DNA (636bp)
protein (212aa)
transmembrane_regions Tax=RIFOXYD2_FULL_OD1_52_8_curated
gwf2_scaffold_4293_21
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(18039..19160)
-----------------
DNA (1122bp)
protein (374aa)
pilM; type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFOXYD1_FULL_OD1_46_19_curated
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM
gwf2_scaffold_4293_22
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19349..20011
-----------------
DNA (663bp)
protein (221aa)
phosphoribosyltransferase Tax=CG_Nomura_03
phosphoribosyltransferase
Phosphoribosyltransferase
gwf2_scaffold_4293_23
unknown

Not on your lists

comp(20063..20251)
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

gwf2_scaffold_4293_24
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20255..21046)
-----------------
DNA (792bp)
protein (264aa)
phosphoglycerate mutase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
phosphoglycerate mutase family protein
Putative uncharacterized protein
gwf2_scaffold_4293_25
unknown

Not on your lists

21237..21986
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

gwf2_scaffold_4293_26
unknown

Not on your lists

21993..22217
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

gwf2_scaffold_4293_27
unknown

Not on your lists

comp(22311..22727)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

gwf2_scaffold_4293_28
unknown

Not on your lists

comp(22865..23293)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

gwf2_scaffold_4293_29
unknown

Not on your lists

comp(23365..23772)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

gwf2_scaffold_4293_30
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

24633..25088
-----------------
DNA (456bp)
protein (152aa)
id=2634695 Tax=RBG_13_RIF_OD1_08_37_53_curated
Displaying items 1-30 of 33 in total

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