ggKbase home page

gwf2_scaffold_1478

Alias: GWF2_OD1_40_12_6

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_1478_1
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1..105
DNA (105bp) protein (35aa)
transposase Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gwf2_scaffold_1478_2
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(165..398)
DNA (234bp) protein (78aa)
Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gwf2_scaffold_1478_3
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

862..1791
DNA (930bp) protein (310aa)
ahpF; alkyl hydroperoxide reductase subunit F (EC:1.6.99.3); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
ahpF; alkyl hydroperoxide reductase subunit F (EC:1.6.99.3)
Alkyl hydroperoxide reductase
gwf2_scaffold_1478_4
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1840..2046)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR43485.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
hypothetical protein
Putative uncharacterized protein
gwf2_scaffold_1478_5
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2378..3055
DNA (678bp) protein (226aa)
Resolvase helix-turn-helix protein Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gwf2_scaffold_1478_6
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3068..3760
DNA (693bp) protein (231aa)
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_
nucleotidyl transferase
Nucleotidyl transferase
gwf2_scaffold_1478_7
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3753..4343
DNA (591bp) protein (197aa)
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:KKR43488.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
Phage SPO1 DNA polymerase-related protein
Phage SPO1 DNA polymerase-related protein
gwf2_scaffold_1478_8
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4366..5124
DNA (759bp) protein (253aa)
Bifunctional protein GlmU {ECO:0000313|EMBL:KKR43489.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Bifunctional protein GlmU
gwf2_scaffold_1478_9
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


5253..5984
DNA (732bp) protein (244aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
gwf2_scaffold_1478_10
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6000..6359
DNA (360bp) protein (120aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
DNA-binding/iron metalloprotein/AP endonuclease
O-sialoglycoprotein endopeptidase (Fragment)
gwf2_scaffold_1478_11
Parcubacteria bacterium GW2011_GWF1_40_6, Parcubacteria, Bacteria

Not on your lists


6430..8580
DNA (2151bp) protein (717aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine-tRNA ligase {ECO:0000313|EMBL:KKR67876.1}; TaxID=1618956 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_6.;"
Valine--tRNA ligase
gwf2_scaffold_1478_12
Parcubacteria bacterium GW2011_GWF1_40_6, Parcubacteria, Bacteria

Not on your lists

8568..9275
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR67877.1}; TaxID=1618956 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_6.;"
Putative uncharacterized protein
gwf2_scaffold_1478_13
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9286..9768
DNA (483bp) protein (161aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
heat shock protein Hsp20
Protein containing Heat shock protein Hsp20 domain
gwf2_scaffold_1478_14
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9968..10198)
DNA (231bp) protein (77aa)
transmembrane_regions Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gwf2_scaffold_1478_15
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10239..10901)
DNA (663bp) protein (221aa)
Periplasmic/7TM domain sensor diguanylate cyclase {ECO:0000313|EMBL:KKR43496.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
response regulator receiver modulated diguanylate cyclase
Periplasmic/7TM domain sensor diguanylate cyclase
gwf2_scaffold_1478_16
Parcubacteria bacterium GW2011_GWF1_40_6, Parcubacteria, Bacteria

Not on your lists

comp(11148..11381)
DNA (234bp) protein (78aa)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKR67881.1}; TaxID=1618956 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_6.;"
glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family
gwf2_scaffold_1478_17
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11506..13932)
DNA (2427bp) protein (809aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
phosphoenolpyruvate synthase
Phosphoenolpyruvate synthase
gwf2_scaffold_1478_18
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14019..15728)
DNA (1710bp) protein (570aa)
hypothetical protein Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
hypothetical protein
Carbohydrate binding family 6
gwf2_scaffold_1478_19
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15768..16979)
DNA (1212bp) protein (404aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000313|EMBL:KKR43500.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
Enolase
gwf2_scaffold_1478_20
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16972..18261)
DNA (1290bp) protein (430aa)
glycerate 2-kinase (EC:1.1.1.81)
Glycerate 2-kinase {ECO:0000313|EMBL:KKR43501.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
Glycerate 2-kinase
gwf2_scaffold_1478_21
Parcubacteria bacterium GW2011_GWF1_40_6, Parcubacteria, Bacteria

Not on your lists

comp(18267..19220)
DNA (954bp) protein (318aa)
D-isomer specific 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KKR69665.1}; TaxID=1618956 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_6.;"
hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase
gwf2_scaffold_1478_22
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19242..19619)
DNA (378bp) protein (126aa)
transmembrane_regions Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
gwf2_scaffold_1478_23
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19831..21711)
DNA (1881bp) protein (627aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
GTP-binding protein LepA
Elongation factor 4
gwf2_scaffold_1478_24
Parcubacteria bacterium GW2011_GWF1_40_6, Parcubacteria, Bacteria

Not on your lists

comp(21736..23511)
DNA (1776bp) protein (592aa)
ABC transporter-related protein {ECO:0000313|EMBL:KKR69661.1}; TaxID=1618956 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_6.;"
hypothetical protein
ABC transporter-related protein
gwf2_scaffold_1478_25
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23576..25255)
DNA (1680bp) protein (560aa)
Integral membrane protein MviN {ECO:0000313|EMBL:KKR43506.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
putative peptidoglycan lipid II flippase MurJ
Integral membrane protein MviN
gwf2_scaffold_1478_26
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25306..27378)
DNA (2073bp) protein (691aa)
Tfp pilus assembly protein PilF Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
Tetratricopeptide TPR_2
Tetratricopeptide TPR_4
gwf2_scaffold_1478_27
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(27425..30280)
DNA (2856bp) protein (952aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA synthetase
gwf2_scaffold_1478_28
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(30371..31372)
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR43509.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
hypothetical protein
Putative uncharacterized protein
gwf2_scaffold_1478_29
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(31398..32300)
DNA (903bp) protein (301aa)
SAM-dependent methyltransferase (EC:2.1.1.64); K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
SAM-dependent methyltransferase (EC:2.1.1.64)
SAM dependent methyltransferase
gwf2_scaffold_1478_30
GWF2_OD1_40_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(32297..33115)
DNA (819bp) protein (273aa)
GTP-binding protein YchF {ECO:0000313|EMBL:KKR43511.1}; TaxID=1618776 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWF2_40_12.;"
GTP-binding protein YchF
GTP-binding protein YchF
Displaying items 1-30 of 36 in total

View Taxonomy