ggKbase home page

gwf1_scaffold_889

Alias: GWF1_WWE3_42_52_plus_9

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf1_scaffold_889_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

2..523
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03287.1}; Flags: Fragment;; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwf1_scaffold_889_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(533..1324)
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwf1_scaffold_889_3
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

1697..2920
-----------------
DNA (1224bp)
protein (408aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03289.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwf1_scaffold_889_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(3122..3457)
-----------------
DNA (336bp)
protein (112aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwf1_scaffold_889_5
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(3561..3860)
-----------------
DNA (300bp)
protein (100aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwf1_scaffold_889_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(3959..4396)
-----------------
DNA (438bp)
protein (146aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwf1_scaffold_889_7
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(4541..5470)
-----------------
DNA (930bp)
protein (310aa)
RimK domain-containing protein ATP-grasp Tax=RIFOXYC1_FULL_WWE3_42_17_curated
RimK protein
RimK domain protein ATP-grasp
gwf1_scaffold_889_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(5551..5670)
-----------------
DNA (120bp)
protein (40aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwf1_scaffold_889_9
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

6207..6425
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03295.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
gwf1_scaffold_889_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(6852..7790)
-----------------
DNA (939bp)
protein (313aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Methionyl-tRNA formyltransferase
gwf1_scaffold_889_11
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7787..8323)
-----------------
DNA (537bp)
protein (179aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Peptide deformylase
gwf1_scaffold_889_12
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

8420..9010
-----------------
DNA (591bp)
protein (197aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
DNA topoisomerase
gwf1_scaffold_889_13
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

9312..10523
-----------------
DNA (1212bp)
protein (404aa)
Topoisomerase protein {ECO:0000313|EMBL:KKS03298.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
DNA topoisomerase
gwf1_scaffold_889_14
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

10646..11416
-----------------
DNA (771bp)
protein (257aa)
laminin G domain-containing protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Cellulose 1,4-beta-cellobiosidase
gwf1_scaffold_889_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

11517..12071
-----------------
DNA (555bp)
protein (185aa)
transmembrane_regions 7..26 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwf1_scaffold_889_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

12083..14824
-----------------
DNA (2742bp)
protein (914aa)
seg 11..25 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwf1_scaffold_889_17
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

14835..15758
-----------------
DNA (924bp)
protein (308aa)
transmembrane_regions 20..42 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwf1_scaffold_889_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


15940..16878
-----------------
DNA (939bp)
protein (313aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKS03303.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2
gwf1_scaffold_889_19
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

16928..17389
-----------------
DNA (462bp)
protein (154aa)
Elongation factor Ts {ECO:0000313|EMBL:KKS03304.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Elongation factor Ts
gwf1_scaffold_889_20
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

17400..17984
-----------------
DNA (585bp)
protein (195aa)
Ribosome-recycling factor {ECO:0000313|EMBL:KKS03305.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Ribosome-recycling factor
gwf1_scaffold_889_21
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

18071..19129
-----------------
DNA (1059bp)
protein (353aa)
Membrane-associated zinc metalloprotease {ECO:0000313|EMBL:KKS03306.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Membrane-associated zinc metalloprotease
gwf1_scaffold_889_22
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

19625..19960
-----------------
DNA (336bp)
protein (112aa)
conserved cytosolic protein; K09117 hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Conserved cytosolic protein
gwf1_scaffold_889_23
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

19961..20317
-----------------
DNA (357bp)
protein (119aa)
Putative rRNA maturation factor {ECO:0000313|EMBL:KKS03308.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
putative rRNA maturation factor
Probable rRNA maturation factor
gwf1_scaffold_889_24
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

20314..20823
-----------------
DNA (510bp)
protein (170aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KKS03309.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Peptidyl-tRNA hydrolase
Peptidyl-tRNA hydrolase
gwf1_scaffold_889_25
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

20991..22616
-----------------
DNA (1626bp)
protein (542aa)
Polymerase III, subunit gamma and tau protein {ECO:0000313|EMBL:KKS03310.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
DNA polymerase III, subunits gamma and tau
gwf1_scaffold_889_26
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

22629..23276
-----------------
DNA (648bp)
protein (216aa)
recR; recombination protein RecR; K06187 recombination protein RecR Tax=RIFOXYC1_FULL_WWE3_42_17_curated
recR; recombination protein RecR
Recombination protein RecR
gwf1_scaffold_889_27
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

23405..24724
-----------------
DNA (1320bp)
protein (440aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Cysteine--tRNA ligase
gwf1_scaffold_889_28
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(24737..26668)
-----------------
DNA (1932bp)
protein (644aa)
Fibronectin type III domain protein {ECO:0000313|EMBL:KKS03313.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
fibronectin type III protein
Fibronectin type III domain protein
gwf1_scaffold_889_29
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

26758..27489
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwf1_scaffold_889_30
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

27521..27805
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy