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gwf1_scaffold_1440

Alias: GWF1_OD1_44_4_2

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf1_scaffold_1440_1
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(2..277)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein; K02909 large subunit ribosomal protein L31 Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
hypothetical protein
50S ribosomal protein L31
gwf1_scaffold_1440_2
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

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540..827
-----------------
DNA (288bp)
protein (96aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR44592.1}; TaxID=1618699 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
rpsB; 30S ribosomal protein S2
Suspect SCG annotation. See neighboring gene [gwf1_scaffold_1440_3].
30S ribosomal protein S2
gwf1_scaffold_1440_3
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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883..1473
-----------------
DNA (591bp)
protein (197aa)
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2
gwf1_scaffold_1440_4
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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1485..2099
-----------------
DNA (615bp)
protein (205aa)
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
tsf; elongation factor Ts
Elongation factor Ts
gwf1_scaffold_1440_5
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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2158..2907
-----------------
DNA (750bp)
protein (250aa)
PSP1 domain-containing protein Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
PSP1 domain-containing protein
PSP1 domain protein
gwf1_scaffold_1440_6
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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2924..3619
-----------------
DNA (696bp)
protein (232aa)
coiled-coil 145..166 Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
gwf1_scaffold_1440_7
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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3913..4191
-----------------
DNA (279bp)
protein (93aa)
excinuclease abc c subunit domain protein Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
excinuclease abc c subunit domain protein
Excinuclease abc c subunit domain protein
gwf1_scaffold_1440_8
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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4401..5465
-----------------
DNA (1065bp)
protein (355aa)
coiled-coil 204..225 Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
gwf1_scaffold_1440_9
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

5449..6348
-----------------
DNA (900bp)
protein (300aa)
PfkB domain-containing protein {ECO:0000313|EMBL:KKR44586.1}; TaxID=1618699 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
PfkB domain-containing protein
PfkB domain-containing protein
gwf1_scaffold_1440_10
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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6497..7924
-----------------
DNA (1428bp)
protein (476aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
amidohydrolase
5-methylthioadenosine/S-adenosylhomocysteine deaminase
gwf1_scaffold_1440_11
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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8148..10460
-----------------
DNA (2313bp)
protein (771aa)
ATPase AAA-2 domain protein Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
hypothetical protein
Endopeptidase Clp ATP-binding chain
gwf1_scaffold_1440_12
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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10504..11526
-----------------
DNA (1023bp)
protein (341aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
pheS; Phenylalanine-tRNA ligase alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit
gwf1_scaffold_1440_13
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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11575..13596
-----------------
DNA (2022bp)
protein (674aa)
phenylalanyl-tRNA synthetase, beta subunit Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
phenylalanyl-tRNA synthetase, beta subunit
Phenylalanine--tRNA ligase beta subunit
gwf1_scaffold_1440_14
GWC1_OD1-i_45_18, Moranbacteria, Parcubacteria, Bacteria

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13638..14885
-----------------
DNA (1248bp)
protein (416aa)
Valyl-tRNA synthetase, valyl-tRNA synthetase {ECO:0000313|EMBL:KKT99949.1}; EC=6.1.1.9 {ECO:0000313|EMBL:KKT99949.1};; TaxID=1618696 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbac
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase
Displaying 14 items

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