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gwc1_scaffold_3665

Alias: GWC1_OP11_44_37_23

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_3665_1
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(3..647)
-----------------
DNA (645bp)
protein (215aa)
Small-conductance mechanosensitive ion channel-like protein Tax=GWD2_OP11_45_10
Conserved TM helix
conserved TM helix repeat-containing protein alias=ACD61_C00050G00008,ACD61_6286.5191.12G0008,ACD61_6286.5191.12_8 id=91910 tax=ACD61 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_2
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

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comp(1072..1446)
-----------------
DNA (375bp)
protein (125aa)
Endoribonuclease L-PSP family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB10_9SPHI alias=ACD52_C00152G00012,ACD52p_6083.12652.9_12,ACD52p_6083.12652.9G0012 id=75758 tax=ACD52 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_group=OP11 organism_desc=OP11
Translation initiation inhibitor {ECO:0000313|EMBL:KKT51003.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
endoribonuclease L-PSP
gwc1_scaffold_3665_3
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

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comp(1478..2419)
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT51004.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
Membrane protein
gwc1_scaffold_3665_4
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(2421..3422)
-----------------
DNA (1002bp)
protein (334aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] alias=ACD61_106874.2913.9_3,ACD61_106874.2913.9G0003,ACD61_C00131G00003 id=92522 tax=ACD61 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria organism_group=OP11 organism_desc=OP11
tRNA dimethylallyltransferase Tax=GWD2_OP11_45_10
gwc1_scaffold_3665_5
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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3481..3936
-----------------
DNA (456bp)
protein (152aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_3665_6
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

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comp(3933..5078)
-----------------
DNA (1146bp)
protein (382aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000313|EMBL:KKT51007.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB
hypothetical protein
RNA modification enzyme, MiaB family; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA alias=ACD61_106874.2913.9G0001,ACD61_106874.2913.9_1,ACD61_C00131G00001 id=92523 tax=ACD61 species=Acidaminococcus fermentans genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_7
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(5078..5353)
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BJH3_9BACT alias=RAAC19_AAC14_scaffold_229_87,RAAC19_C00003G00087 id=699303 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
DNA-binding protein HU {ECO:0000313|EMBL:KKU45572.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
gwc1_scaffold_3665_8
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(5406..6299)
-----------------
DNA (894bp)
protein (298aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1); K15986 manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] alias=gwa2_scaffold_497_9 id=5044078 tax=GW2011_AR18 species=Clostridium acetobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=gwa2_.30_20c
Probable manganese-dependent inorganic pyrophosphatase Tax=GWD2_OP11_45_10
inorganic diphosphatase
gwc1_scaffold_3665_9
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(6314..7804)
-----------------
DNA (1491bp)
protein (497aa)
Ribonuclease Y Tax=GWD2_OP11_45_10
hypothetical protein
cst:CLOST_1678 hypothetical protein; K06950 uncharacterized protein alias=RAAC19_AAC14_scaffold_229_86,RAAC19_C00003G00086 id=699302 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
gwc1_scaffold_3665_10
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(7997..8476)
-----------------
DNA (480bp)
protein (160aa)
Regulatory protein RecX Tax=GWD2_OP11_45_10
Regulatory protein RecX
gwc1_scaffold_3665_11
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists


comp(8451..9512)
-----------------
DNA (1062bp)
protein (354aa)
recA; recombinase A (EC:3.6.3.8)
Protein RecA Tax=GWD2_OP11_45_10
ccb:Clocel_2062 RecA protein; K03553 recombination protein RecA alias=ACD40_C00046G00017,ACD40_17618.22185.15G0017,ACD40_17618.22185.15_17 id=51863 tax=ACD40 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_12
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(9558..10421)
-----------------
DNA (864bp)
protein (288aa)
Tax=GWD2_OP11_45_10
gwc1_scaffold_3665_13
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

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comp(10587..11279)
-----------------
DNA (693bp)
protein (231aa)
Polymorphic outer membrane protein Tax=GWD2_OP11_45_10
seg 1..12 alias=ACD61_3423.3983.9_1,ACD61_3423.3983.9G0001,ACD61_C00055G00001 id=91990 tax=ACD61 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_14
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(11330..11596)
-----------------
DNA (267bp)
protein (89aa)
Polymorphic outer membrane protein Tax=GWD2_OP11_45_10
gwc1_scaffold_3665_15
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(11695..12843)
-----------------
DNA (1149bp)
protein (383aa)
Putative uncharacterized protein Tax=GWD2_OP11_45_10
hypothetical protein
hypothetical protein alias=ACD61_3423.3983.9G0002,ACD61_3423.3983.9_2,ACD61_C00055G00002 id=91989 tax=ACD61 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_16
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

12904..13869
-----------------
DNA (966bp)
protein (322aa)
hya:HY04AAS1_1611 NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] alias=ACD61_3423.3983.9G0003,ACD61_3423.3983.9_3,ACD61_C00055G00003 id=91991 tax=ACD61 species=Hydrogenobaculum sp. Y04AAS1 genus=Hydrogenobaculum taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=OP11 organism_desc=OP11
NAD-dependent epimerase/dehydratase Tax=GWD2_OP11_45_10
NAD-dependent epimerase/dehydratase
gwc1_scaffold_3665_17
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(13829..15553)
-----------------
DNA (1725bp)
protein (575aa)
SH3 type 3 domain protein Tax=GWD2_OP11_45_10
SH3 type 3 domain-containing protein
hypothetical protein; K06990 alias=ACD61_C00125G00001,ACD61_2836.2990.10G0001,ACD61_2836.2990.10_1 id=92489 tax=ACD61 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_18
GWB2_OP11_44_22, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(15550..20769)
-----------------
DNA (5220bp)
protein (1740aa)
Alpha-2-macroglobulin {ECO:0000313|EMBL:KKT51037.1}; TaxID=1618387 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWB2_44_22.;"
alpha-2-macroglobulin domain protein
sth:STH2830 hypothetical protein; K06894 alias=ACD61_C00126G00002,ACD61_31343.3723.10G0002,ACD61_31343.3723.10_2 id=92492 tax=ACD61 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3665_19
GWD2_OP11_45_10, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(20814..21509)
-----------------
DNA (696bp)
protein (232aa)
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII Tax=GWD2_OP11_45_10
Ribonuclease HII
Displaying 19 items

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