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gwc1_scaffold_5350

Alias: GWC1_OD1_40_13_14

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_5350_1

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comp(214..873)
-----------------
DNA (660bp)
protein (220aa)
Phosphoribosyltransferase {ECO:0000313|EMBL:KKR46834.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
phosphoribosyltransferase
Phosphoribosyltransferase
gwc1_scaffold_5350_2

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1131..2252
-----------------
DNA (1122bp)
protein (374aa)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKR46835.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM
gwc1_scaffold_5350_3
GWA1_OD1_40_21, Parcubacteria, Bacteria

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2594..3202
-----------------
DNA (609bp)
protein (203aa)
Tax=GWA1_OD1_40_21
gwc1_scaffold_5350_4
GWA1_OD1_40_21, Parcubacteria, Bacteria

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3206..3757
-----------------
DNA (552bp)
protein (184aa)
Tax=GWA1_OD1_40_21
gwc1_scaffold_5350_5
GWA1_OD1_40_21, Parcubacteria, Bacteria

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3770..4129
-----------------
DNA (360bp)
protein (120aa)
Tax=GWA1_OD1_40_21
gwc1_scaffold_5350_6

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4183..5907
-----------------
DNA (1725bp)
protein (575aa)
Type II secretion system protein E {ECO:0000313|EMBL:KKR46839.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
type II secretion system protein E
type II secretion system protein E
gwc1_scaffold_5350_7

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5991..6383
-----------------
DNA (393bp)
protein (131aa)
Response regulator receiver protein {ECO:0000313|EMBL:KKR46840.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Two component transcriptional regulator, winged helix
Response regulator receiver protein
gwc1_scaffold_5350_8

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6397..7494
-----------------
DNA (1098bp)
protein (366aa)
Pili biogenesis protein ATPase {ECO:0000313|EMBL:KKR46841.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
pilus retraction protein PilT
Pili biogenesis protein ATPase
gwc1_scaffold_5350_9

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7581..8744
-----------------
DNA (1164bp)
protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR46842.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Type II secretion system F domain
Type II secretion system F domain
gwc1_scaffold_5350_10
GWA1_OD1_40_21, Parcubacteria, Bacteria

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8871..9296
-----------------
DNA (426bp)
protein (142aa)
DNA polymerase beta domain protein region Tax=GWA1_OD1_40_21
DNA polymerase beta domain protein region
gwc1_scaffold_5350_11
GWA1_OD1_40_21, Parcubacteria, Bacteria

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9306..9737
-----------------
DNA (432bp)
protein (144aa)
Putative uncharacterized protein Tax=GWA1_OD1_40_21
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_5350_12
GWA1_OD1_40_21, Parcubacteria, Bacteria

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10073..10528
-----------------
DNA (456bp)
protein (152aa)
Putative uncharacterized protein Tax=GWA1_OD1_40_21
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_5350_13
GWA1_OD1_40_21, Parcubacteria, Bacteria

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10675..11220
-----------------
DNA (546bp)
protein (182aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=GWA1_OD1_40_21
pilA; pilin polypeptide
transmembrane_regions 20..42 alias=ACD81_C00038G00004,ACD81_281.7867.53G0004,ACD81_281.7867.53_4 id=133678 tax=ACD81 species=OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5350_14
GWA1_OD1_40_21, Parcubacteria, Bacteria

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11422..12273
-----------------
DNA (852bp)
protein (284aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=GWA1_OD1_40_21
peptidase A24A domain-containing protein
Type 4 prepilin-like proteins leader peptide-processing enzyme
gwc1_scaffold_5350_15

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12290..12484
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR46848.1}; Flags: Fragment;; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Displaying 15 items

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