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gwc1_scaffold_6027

Alias: GWC1_OD1_40_13_20

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_6027_1

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comp(1..180)
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR46426.1}; Flags: Fragment;; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
gwc1_scaffold_6027_2

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259..573
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR46427.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
gwc1_scaffold_6027_3

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comp(602..1267)
-----------------
DNA (666bp)
protein (222aa)
30S ribosomal protein S3 {ECO:0000313|EMBL:KKR46428.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
30S ribosomal protein S3
30S ribosomal protein S3
gwc1_scaffold_6027_4
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(1273..1680)
-----------------
DNA (408bp)
protein (136aa)
50S ribosomal protein L22 Tax=GWA1_OD1_40_21
50S ribosomal protein L22
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 alias=ACD81_C00041G00014,ACD81_2348.15643.51G0014,ACD81_2348.15643.51_14 id=133702 tax=ACD81 species=Mesoplasma florum genus=Mesoplasma taxon_order=Entomoplasmatales taxon_class=Mollicutes phylum=Tenericutes organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_6027_5

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comp(1684..2025)
-----------------
DNA (342bp)
protein (114aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKR46430.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
30S ribosomal protein S19
Ribosomal protein S19
gwc1_scaffold_6027_6

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comp(2134..2856)
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR46431.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
gwc1_scaffold_6027_7

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comp(2822..3226)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP65_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKR46432.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
hypothetical protein
gwc1_scaffold_6027_8
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(3233..4285)
-----------------
DNA (1053bp)
protein (351aa)
Predicted protein Tax=GWA1_OD1_40_21
hypothetical protein
Predicted protein
gwc1_scaffold_6027_9
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(4290..4976)
-----------------
DNA (687bp)
protein (229aa)
Putative membrane protein Tax=GWA1_OD1_40_21
hypothetical protein
Putative membrane protein
gwc1_scaffold_6027_10

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comp(5140..5754)
-----------------
DNA (615bp)
protein (205aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKR46435.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
rplB; 50S ribosomal protein L2
50S ribosomal protein L2
gwc1_scaffold_6027_11

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comp(5751..5981)
-----------------
DNA (231bp)
protein (77aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKR46436.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Suspect SCG annotation. See neighboring gene [gwc1_scaffold_6027_10].
50S ribosomal protein L2
gwc1_scaffold_6027_12
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists


comp(5995..6393)
-----------------
DNA (399bp)
protein (133aa)
50S ribosomal protein L23 Tax=GWA1_OD1_40_21
50S ribosomal protein L23
50S ribosomal protein L23
gwc1_scaffold_6027_13
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(6415..7092)
-----------------
DNA (678bp)
protein (226aa)
50S ribosomal protein L4 {ECO:0000313|EMBL:KKR52861.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
50S ribosomal protein L4P
50S ribosomal protein L4
gwc1_scaffold_6027_14
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(7231..7818)
-----------------
DNA (588bp)
protein (196aa)
50S ribosomal protein L3 {ECO:0000313|EMBL:KKR52860.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
rplC; 50S ribosomal protein L3
50S ribosomal protein L3
gwc1_scaffold_6027_15
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(7947..8339)
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S10 Tax=GWA1_OD1_40_21
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10
gwc1_scaffold_6027_16

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comp(8348..8479)
-----------------
DNA (132bp)
protein (44aa)
tufA2; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu {ECO:0000313|EMBL:KKR46441.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Elongation factor Tu
gwc1_scaffold_6027_17

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comp(8449..9411)
-----------------
DNA (963bp)
protein (321aa)
tufA; translation elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu {ECO:0000313|EMBL:KKR46442.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
Elongation factor Tu
gwc1_scaffold_6027_18
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(9852..10394)
-----------------
DNA (543bp)
protein (181aa)
Tax=GWA1_OD1_40_21
gwc1_scaffold_6027_19

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comp(10413..11630)
-----------------
DNA (1218bp)
protein (406aa)
Type II secretion pathway protein F {ECO:0000313|EMBL:KKR46444.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
epsF; type II secretion pathway protein F
Type II secretion pathway protein F
gwc1_scaffold_6027_20
GWA1_OD1_40_21, Parcubacteria, Bacteria

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comp(11864..13621)
-----------------
DNA (1758bp)
protein (586aa)
Type II secretion system protein E Tax=GWA1_OD1_40_21
secretion system protein E
Type II secretion system protein E
gwc1_scaffold_6027_21
GWA1_OD1_40_21, Parcubacteria, Bacteria

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13871..15052
-----------------
DNA (1182bp)
protein (394aa)
NusA antitermination factor {ECO:0000313|EMBL:KKR52854.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
NusA antitermination factor
NusA antitermination factor
gwc1_scaffold_6027_22

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15085..15615
-----------------
DNA (531bp)
protein (177aa)
Inorganic diphosphatase, inorganic pyrophosphatase {ECO:0000313|EMBL:KKR46447.1}; EC=3.6.1.1 {ECO:0000313|EMBL:KKR46447.1};; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bac
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] alias=ACD48_49364.2380.6G0001,ACD48_49364.2380.6_1,ACD48_C00326G00001 id=68496 tax=ACD48 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
Displaying 22 items

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