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gwc1_scaffold_3974

Alias: GWC1_WWE3_42_102_15

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_3974_1
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

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69..227
DNA (159bp) protein (53aa)
50S ribosomal protein L34 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
50S ribosomal protein L34
seg 32..45 alias=ACD24_C00056G00007,ACD24_2170.8239.19G0007,ACD24_2170.8239.19_7 id=27843 tax=ACD24 species=WWE3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
gwc1_scaffold_3974_2
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

234..572
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02846.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_3974_3
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

523..738
DNA (216bp) protein (72aa)
hypothetical protein; K08998 hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
hypothetical protein; K08998 hypothetical protein alias=RAAC2_WWE3_C00001G00775,RAAC2_WWE3_775 id=725822 tax=RAAC2_WWE3 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=WWE3
gwc1_scaffold_3974_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

745..1578
DNA (834bp) protein (278aa)
stage III sporulation protein J; K03217 preprotein translocase subunit YidC Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
inner membrane protein oxaA; K03217 preprotein translocase subunit YidC alias=RAAC2_WWE3_C00001G00774,RAAC2_WWE3_774 id=725821 tax=RAAC2_WWE3 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=WWE3
gwc1_scaffold_3974_5
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

1575..2027
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02843.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Uncharacterized protein
gwc1_scaffold_3974_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2030..3142
DNA (1113bp) protein (371aa)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7)
dnaN; DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] alias=RAAC2_WWE3_C00001G00772,RAAC2_WWE3_772 id=725819 tax=RAAC2_WWE3 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=WWE3
gwc1_scaffold_3974_7
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(3167..5065)
DNA (1899bp) protein (633aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
cai:Caci_4080 type IV secretory pathway VirB4 protein-like protein alias=RAAC2_WWE3_C00001G00771,RAAC2_WWE3_771 id=725818 tax=RAAC2_WWE3 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
gwc1_scaffold_3974_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(5067..5507)
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwc1_scaffold_3974_9
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(5476..5679)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02840.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_3974_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(5681..7357)
DNA (1677bp) protein (559aa)
coiled-coil 366..405 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwc1_scaffold_3974_11
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7372..10467)
DNA (3096bp) protein (1032aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
GDP-mannose 4,6 dehydratase ISS
GDP-mannose 4,6 dehydratase (ISS) alias=RAAC2_WWE3_C00001G00768,RAAC2_WWE3_768 id=725815 tax=RAAC2_WWE3 species=Ostreococcus tauri genus=Ostreococcus taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta organism_group=WWE3
gwc1_scaffold_3974_12
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

10605..11210
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02837.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_3974_13
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

11207..11626
DNA (420bp) protein (140aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] alias=RAAC2_WWE3_C00001G00766,RAAC2_WWE3_766 id=725813 tax=RAAC2_WWE3 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
Uncharacterized protein {ECO:0000313|EMBL:KKS02836.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_3974_14
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

11628..12500
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02835.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_3974_15
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(12557..14197)
DNA (1641bp) protein (547aa)
60 kDa chaperonin {ECO:0000313|EMBL:KKS02834.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
cap:CLDAP_06600 groL; 60 kDa chaperonin; K04077 chaperonin GroEL alias=RAAC2_WWE3_C00001G00764,RAAC2_WWE3_764 id=725811 tax=RAAC2_WWE3 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi organism_group=WWE3
gwc1_scaffold_3974_16
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(14211..14513)
DNA (303bp) protein (101aa)
10 kDa chaperonin {ECO:0000313|EMBL:KKS02833.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
chaperonin GroS; K04078 chaperonin GroES alias=RAAC2_WWE3_C00001G00763,RAAC2_WWE3_763 id=725810 tax=RAAC2_WWE3 species=unknown genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
gwc1_scaffold_3974_17
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(14612..14989)
DNA (378bp) protein (126aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] alias=ACD13_C00115G00001,ACD13_9641.2250.7G0001,ACD13_9641.2250.7_1 id=7617 tax=ACD13 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OP11 organism_desc=OP11
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS02832.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Suspect SCG annotation. See neighboring gene [gwc1_scaffold_3974_18].
gwc1_scaffold_3974_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(15010..15411)
DNA (402bp) protein (134aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] alias=ACD13_C00115G00001,ACD13_9641.2250.7G0001,ACD13_9641.2250.7_1 id=7617 tax=ACD13 species=Treponema denticola genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OP11 organism_desc=OP11
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS02832.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Suspect SCG annotation. See neighboring gene [gwc1_scaffold_3974_19].
gwc1_scaffold_3974_19
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


comp(15471..16256)
DNA (786bp) protein (262aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
tde:TDE1659 alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] alias=RAAC2_WWE3_C00001G00762,RAAC2_WWE3_762 id=725809 tax=RAAC2_WWE3 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=WWE3
hypothetical protein
gwc1_scaffold_3974_20
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(16253..16390)
DNA (138bp) protein (46aa)
Tax=GWD2_WWE3_42_34
Displaying 20 items

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