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gwc1_scaffold_5050

Alias: GWC1_WWE3_42_102_22

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_5050_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02112.1}; Flags: Fragment;; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
gwc1_scaffold_5050_2
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

281..1831
DNA (1551bp) protein (517aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02113.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_5050_3
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(1821..3056)
DNA (1236bp) protein (412aa)
Glycoside hydrolase family 18 {ECO:0000313|EMBL:KKS02114.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Glycoside hydrolase family 18
Glycoside hydrolase family 18
gwc1_scaffold_5050_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3136..4356
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_5050_5
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

4353..5630
DNA (1278bp) protein (426aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T3S1_9EURY alias=RAAC2_WWE3_177,RAAC2_WWE3_C00001G00177 id=725224 tax=RAAC2_WWE3 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_group=WWE3
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKS02116.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
Membrane protein involved in the export of O-antigen and teichoic acid
gwc1_scaffold_5050_6
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

5620..6786
DNA (1167bp) protein (389aa)
O-antigen polymerase {ECO:0000313|EMBL:KKS02117.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
O-antigen polymerase
O-antigen polymerase
gwc1_scaffold_5050_7
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(6764..7495)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02118.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
hypothetical protein alias=RAAC2_WWE3_179,RAAC2_WWE3_C00001G00179 id=725226 tax=RAAC2_WWE3 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_5050_8
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(7497..8303)
DNA (807bp) protein (269aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] alias=RAAC2_WWE3_180,RAAC2_WWE3_C00001G00180 id=725227 tax=RAAC2_WWE3 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:KKS02119.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_5050_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(8758..9243)
DNA (486bp) protein (162aa)
transmembrane_regions 15..36 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_5050_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

9731..11359
DNA (1629bp) protein (543aa)
family X DNA polymerase IV; K02347 DNA polymerase (family X) Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
nis:NIS_1287 family X DNA polymerase IV; K02347 DNA polymerase (family X) alias=RAAC2_WWE3_C00001G00199,RAAC2_WWE3_199 id=725246 tax=RAAC2_WWE3 species=Nitratiruptor sp. SB155-2 genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=WWE3
gwc1_scaffold_5050_11
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

11419..11961
DNA (543bp) protein (181aa)
LemA protein {ECO:0000313|EMBL:KKS03644.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
LemA family protein; K03744 LemA protein alias=RAAC2_WWE3_C00001G00200,RAAC2_WWE3_200 id=725247 tax=RAAC2_WWE3 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_group=WWE3
gwc1_scaffold_5050_12
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

11915..12436
DNA (522bp) protein (174aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKS03643.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
NUDIX hydrolase
gwc1_scaffold_5050_13
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

12433..13332
DNA (900bp) protein (300aa)
rxy:Rxyl_0345 HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] alias=RAAC2_WWE3_C00001G00202,RAAC2_WWE3_202 id=725249 tax=RAAC2_WWE3 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
Protease HtpX-like protein {ECO:0000313|EMBL:KKS03642.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_5050_14
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

13374..13682
DNA (309bp) protein (103aa)
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] alias=ACD24_306722.3109.6G0002,ACD24_306722.3109.6_2,ACD24_C00270G00002 id=28999 tax=ACD24 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=WWE3 organism_desc=WWE3
gwc1_scaffold_5050_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

13675..14817
DNA (1143bp) protein (381aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
tmt:Tmath_0652 glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] alias=RAAC2_WWE3_C00001G00204,RAAC2_WWE3_204 id=725251 tax=RAAC2_WWE3 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
hypothetical protein
gwc1_scaffold_5050_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

14762..14944
DNA (183bp) protein (61aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
tmt:Tmath_0652 glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] alias=RAAC2_WWE3_C00001G00204,RAAC2_WWE3_204 id=725251 tax=RAAC2_WWE3 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3
hypothetical protein
gwc1_scaffold_5050_17
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

14947..15339
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwc1_scaffold_5050_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

15343..15624
DNA (282bp) protein (94aa)
adg:Adeg_1097 glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] alias=RAAC2_WWE3_C00001G00206,RAAC2_WWE3_206 id=725253 tax=RAAC2_WWE3 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000313|EMBL:KKS03638.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_G
hypothetical protein
gwc1_scaffold_5050_19
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

15807..16424
DNA (618bp) protein (206aa)
glu-trnagln amidotransferase suBunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
adg:Adeg_1097 glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] alias=RAAC2_WWE3_C00001G00206,RAAC2_WWE3_206 id=725253 tax=RAAC2_WWE3 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
hypothetical protein
gwc1_scaffold_5050_20
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(16512..16775)
DNA (264bp) protein (88aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwc1_scaffold_5050_21
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(16792..17034)
DNA (243bp) protein (81aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwc1_scaffold_5050_22
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

17166..17438
DNA (273bp) protein (91aa)
rxy:Rxyl_3166 DNA-directed DNA polymerase; K02335 DNA polymerase I [EC:2.7.7.7] alias=RAAC2_WWE3_C00001G00208,RAAC2_WWE3_208 id=725255 tax=RAAC2_WWE3 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria organism_group=WWE3
Polymerase protein {ECO:0000313|EMBL:KKS03635.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Displaying 22 items

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