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gwc1_scaffold_3775

Alias: GWC1_OD1_45_14_24

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_3775_1
GWC1_OD1_45_14, Parcubacteria, Bacteria

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1..267
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein; K07011 Tax=GWC1_OD1_45_14
putative glycosyltransferase
hypothetical protein; K07011 alias=ACD11_475.63843.30_17,ACD11_475.63843.30G0017,ACD11_C00015G00017 id=3166 tax=ACD11 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_2
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

292..960
-----------------
DNA (669bp)
protein (223aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_3
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

951..1463
-----------------
DNA (513bp)
protein (171aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_4
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

1441..2646
-----------------
DNA (1206bp)
protein (402aa)
hypothetical protein Tax=GWC1_OD1_45_14
waaL; O-antigen ligase
transmembrane_regions 319..341 alias=ACD11_475.63843.30G0019,ACD11_475.63843.30_19,ACD11_C00015G00019 id=3193 tax=ACD11 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_5
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(2628..3755)
-----------------
DNA (1128bp)
protein (376aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_6
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(3767..4939)
-----------------
DNA (1173bp)
protein (391aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_7
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(4950..7409)
-----------------
DNA (2460bp)
protein (820aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_8
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(7564..8205)
-----------------
DNA (642bp)
protein (214aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_9
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(8430..8558)
-----------------
DNA (129bp)
protein (43aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_10
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(8688..9116)
-----------------
DNA (429bp)
protein (143aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=GWC1_OD1_45_14
lipoprotein signal peptidase (EC:3.4.23.36)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] alias=ACD15_C00046G00016,ACD15_19057.52719.18G0016,ACD15_19057.52719.18_16 id=8948 tax=ACD15 species=Thermoanaerobacter mathranii genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_11
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(9119..9472)
-----------------
DNA (354bp)
protein (118aa)
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KKT93298.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
TraR/DksA family transcriptional regulator
transcriptional regulator, TraR/DksA family alias=ACD11_475.63843.30G0025,ACD11_475.63843.30_25,ACD11_C00015G00025 id=3156 tax=ACD11 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_12
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(9569..9964)
-----------------
DNA (396bp)
protein (132aa)
protein of unknown function UPF0102; K07460 putative endonuclease Tax=GWC1_OD1_45_14
protein of unknown function UPF0102; K07460 putative endonuclease alias=ACD12_C00109G00001,ACD12_4998.3330.6G0001,ACD12_4998.3330.6_1 id=4510 tax=ACD12 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=OP11 organism_desc=
gwc1_scaffold_3775_13
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(9995..10267)
-----------------
DNA (273bp)
protein (91aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_14
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(10844..12112)
-----------------
DNA (1269bp)
protein (423aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_15
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(12196..14403)
-----------------
DNA (2208bp)
protein (736aa)
tjr:TherJR_1385 polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=GWC1_OD1_45_14
tjr:TherJR_1385 polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD5_213.52356.104G0026,ACD5_213.52356.104_26,ACD1_C00046G00026 id=17043 tax=ACD1 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
pnp; polynucleotide phosphorylase
gwc1_scaffold_3775_16
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(14516..15022)
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein Tax=GWC1_OD1_45_14
hypothetical protein
hypothetical protein alias=ACD11_475.63843.30G0029,ACD11_475.63843.30_29,ACD11_C00015G00029 id=3157 tax=ACD11 species=Haloarcula marismortui genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_17
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(15460..16905)
-----------------
DNA (1446bp)
protein (482aa)
bhy:BHWA1_01411 polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=GWC1_OD1_45_14
bhy:BHWA1_01411 polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] alias=ACD5_C00176G00018,ACDUNK_73408.24200.11G0018,ACDUNK_73408.24200.11_18 id=89269 tax=ACD5 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1-i organism_desc=OD1-i
polyA polymerase
gwc1_scaffold_3775_18
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

17453..19369
-----------------
DNA (1917bp)
protein (639aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_19
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(19380..20378)
-----------------
DNA (999bp)
protein (333aa)
hypothetical protein Tax=GWC1_OD1_45_14
transposase, IS30 family
lbf:LBF_2982 IS30 family transposase alias=ACD63_C00025G00001,ACD63_99308.24237.9G0001,ACD63_99308.24237.9_1 id=95996 tax=ACD63 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_3775_20
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

20844..21791
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein Tax=GWC1_OD1_45_14
thrombospondin type 3 repeat-containing protein
hypothetical protein alias=ACD11_C00015G00040,ACD11_475.63843.30G0040,ACD11_475.63843.30_40 id=3151 tax=ACD11 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_21
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

21799..22803
-----------------
DNA (1005bp)
protein (335aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_22
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(23004..23948)
-----------------
DNA (945bp)
protein (315aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_23
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(23969..25810)
-----------------
DNA (1842bp)
protein (614aa)
ATP-dependent metalloprotease FtsH, cell division protease FtsH {ECO:0000313|EMBL:KKT93310.1}; EC=3.4.24.- {ECO:0000313|EMBL:KKT93310.1};; EC=3.6.4.3 {ECO:0000313|EMBL:KKT93310.1};; TaxID=1618915 spec
ftsH; cell division protein FtsH (EC:3.4.24.-)
ttr:Tter_1052 ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] alias=ACD11_475.63843.30_37,ACD11_475.63843.30G0037,ACD11_C00015G00037 id=3200 tax=ACD11 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3775_24
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(25839..26813)
-----------------
DNA (975bp)
protein (325aa)
mesJ; cell cycle protein MesJ; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.-] Tax=GWC1_OD1_45_14
mesJ; cell cycle protein MesJ; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.-] alias=ACD11_C00062G00001,ACD11_68202.2560.5G0001,ACD11_68202.2560.5_1 id=3519 tax=ACD11 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
tRNA(Ile)-lysidine synthetase
gwc1_scaffold_3775_25
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(26806..27369)
-----------------
DNA (564bp)
protein (188aa)
Guanylate kinase Tax=GWC1_OD1_45_14
hypothetical protein
Guanylate kinase
gwc1_scaffold_3775_26
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

27454..28161
-----------------
DNA (708bp)
protein (236aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_27
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

28242..28445
-----------------
DNA (204bp)
protein (68aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3775_28
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(28536..29432)
-----------------
DNA (897bp)
protein (299aa)
RNA binding S1 domain protein {ECO:0000313|EMBL:KKT93315.1}; Flags: Fragment;; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
RNA binding S1 protein
RNA binding S1 domain protein
Displaying 28 items

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