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gwc1_scaffold_3915

Alias: GWC1_OD1_45_14_26

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_3915_1
GWC1_OD1_45_14, Parcubacteria, Bacteria

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comp(3..1382)
-----------------
DNA (1380bp)
protein (460aa)
ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CKB4_9FIRM alias=ACD1_C00017G00028,ACD1_706.36870.84G0028,ACD1_706.36870.84_28 id=16818 tax=ACD1 species=Anaerococcus tetradius genus=Anaerococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
ABC superfamily ATP binding cassette transporter, ABC protein Tax=GWC1_OD1_45_14
hypothetical protein
gwc1_scaffold_3915_2
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(1546..2022)
-----------------
DNA (477bp)
protein (159aa)
Small multidrug export protein n=2 Tax=Methanosarcina mazei RepID=M1QAH8_METMZ
Small multidrug export protein Tax=GWC1_OD1_45_14
Small multidrug export protein
gwc1_scaffold_3915_3
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(2095..3417)
-----------------
DNA (1323bp)
protein (441aa)
Metalloendopeptidase-like protein membrane protein {ECO:0000313|EMBL:KKT93062.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
peptidase M23
metalloendopeptidase-like membrane protein alias=ACD15_8787.35293.16G0033,ACD15_8787.35293.16_33,ACD15_C00019G00033 id=8355 tax=ACD15 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_4
GWC1_OD1_45_14, Parcubacteria, Bacteria

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comp(3706..4110)
-----------------
DNA (405bp)
protein (135aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3915_5
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(4126..4497)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT93064.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
hypothetical protein
protein of unknown function DUF1428 alias=ACD7_C00275G00007,ACD7p_119.13957.78_7,ACD7p_119.13957.78G0007 id=131670 tax=ACD7 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_6
GWC1_OD1_45_14, Parcubacteria, Bacteria

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4657..5130
-----------------
DNA (474bp)
protein (158aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3915_7
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(5238..6047)
-----------------
DNA (810bp)
protein (270aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3915_8
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

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comp(6260..6520)
-----------------
DNA (261bp)
protein (87aa)
MtN3/saliva family {ECO:0000313|EMBL:KKT89104.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_45_10.;"
MtN3/saliva family
transmembrane_regions 73..95 alias=ACD49_39878.259358.21G0225,ACD49_39878.259358.21_225,ACD49_C00003G00225 id=68711 tax=ACD49 species=BD1-5 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=BD1-5 organism_desc=BD1-5
gwc1_scaffold_3915_9
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(6530..7456)
-----------------
DNA (927bp)
protein (309aa)
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KKT93068.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
3-demethylubiquinone-9 3-methyltransferase
amt:Amet_1912 3-demethylubiquinone-9 3-methyltransferase alias=ACD56_16882.47659.15G0003,ACD56_16882.47659.15_3,ACD56_C00008G00003 id=83997 tax=ACD56 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_10
GWC1_OD1_45_14, Parcubacteria, Bacteria

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comp(7582..8541)
-----------------
DNA (960bp)
protein (320aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3915_11
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(8613..9599)
-----------------
DNA (987bp)
protein (329aa)
Cyanophycin synthase {ECO:0000313|EMBL:KKT93070.1}; EC=6.3.2.29 {ECO:0000313|EMBL:KKT93070.1};; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
Cyanophycin synthase (EC:6.3.2.29 6.3.2.30)
cyanophycin synthase (EC:6.3.2.29 6.3.2.30) alias=ACD15_89501.2994.6G0003,ACD15_89501.2994.6_3,ACD15_C00079G00003 id=9295 tax=ACD15 species=Flavobacteriaceae bacterium 3519-10 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_12
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

9790..10713
-----------------
DNA (924bp)
protein (308aa)
Transposase {ECO:0000313|EMBL:KKT93071.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
transposase
Transposase
gwc1_scaffold_3915_13
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(10770..11366)
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein Tax=GWC1_OD1_45_14
hypothetical protein
hypothetical protein alias=ACD50_C00038G00014,ACD50_246809.22764.8G0014,ACD50_246809.22764.8_14 id=71677 tax=ACD50 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_3915_14
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(11600..12070)
-----------------
DNA (471bp)
protein (157aa)
Tax=GWC1_OD1_45_14
gwc1_scaffold_3915_15
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(12411..12779)
-----------------
DNA (369bp)
protein (123aa)
s23 ribosomal protein Tax=GWC1_OD1_45_14
hypothetical protein
s23 ribosomal protein alias=ACD1_C00003G00011,ACD1_908.67947.94G0011,ACD1_908.67947.94_11 id=16396 tax=ACD1 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_16
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(12823..14151)
-----------------
DNA (1329bp)
protein (443aa)
nth:Nther_1215 RNA polymerase, sigma 70 subunit, RpoD family; K03086 RNA polymerase primary sigma factor Tax=GWC1_OD1_45_14
RNA polymerase sigma factor RpoD
nth:Nther_1215 RNA polymerase, sigma 70 subunit, RpoD family; K03086 RNA polymerase primary sigma factor alias=ACD11_461.21898.31G0004,ACD11_461.21898.31_4,ACD11_C00023G00004 id=3296 tax=ACD11 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_3915_17
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(14328..14732)
-----------------
DNA (405bp)
protein (135aa)
Tax=GWC1_OD1_45_14
Displaying 17 items

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