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This organism can only be binned in the context of its binning project GWC2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwd2_scaffold_1084

Alias: GWD2_OD1_52_7_1

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwd2_scaffold_1084_1
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

60..527
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein Tax=GWD2_OD1_52_7
hypothetical protein
Uncharacterized protein
gwd2_scaffold_1084_2
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(478..1209)
-----------------
DNA (732bp)
protein (244aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_3
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1214..1585)
-----------------
DNA (372bp)
protein (124aa)
Integral membrane protein CcmA involved in cell shape determination Tax=GWD2_OD1_52_7
cell shape determination protein CcmA
Integral membrane protein CcmA involved in cell shape determination
gwd2_scaffold_1084_4
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(1626..3329)
-----------------
DNA (1704bp)
protein (568aa)
hypothetical protein SclubSA_00789 Tax=GWD2_OD1_52_7
arginyl-tRNA synthetase
hypothetical protein SclubSA_00789
gwd2_scaffold_1084_5
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3332..4540)
-----------------
DNA (1209bp)
protein (403aa)
Tyrosine--tRNA ligase Tax=GWD2_OD1_52_7
tyrosyl-tRNA synthetase
Tyrosine--tRNA ligase
gwd2_scaffold_1084_6
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4550..7195)
-----------------
DNA (2646bp)
protein (882aa)
Valine--tRNA ligase Tax=GWD2_OD1_52_7
valS; valyl-tRNA synthetase
Valine--tRNA ligase
gwd2_scaffold_1084_7
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7256..8509)
-----------------
DNA (1254bp)
protein (418aa)
rpoA; DNA-directed RNA polymerase subuit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=GWD2_OD1_52_7
DNA-directed RNA polymerase subunit alpha
gwd2_scaffold_1084_8
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

8656..9795
-----------------
DNA (1140bp)
protein (380aa)
Phosphoesterase RecJ domain protein Tax=GWD2_OD1_52_7
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein
gwd2_scaffold_1084_9
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

9853..11289
-----------------
DNA (1437bp)
protein (479aa)
polynucleotide adenylyltransferase Tax=GWD2_OD1_52_7
polynucleotide adenylyltransferase
polynucleotide adenylyltransferase
gwd2_scaffold_1084_10
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

11283..11516
-----------------
DNA (234bp)
protein (78aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_11
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11580..12170)
-----------------
DNA (591bp)
protein (197aa)
UPI0002654479 related cluster Tax=GWD2_OD1_52_7
metal dependent phosphohydrolase with HD domain
UPI0002654479 related cluster
gwd2_scaffold_1084_12
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12585..12968)
-----------------
DNA (384bp)
protein (128aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_13
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12965..13129)
-----------------
DNA (165bp)
protein (55aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_14
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

13314..14222
-----------------
DNA (909bp)
protein (303aa)
ribosomal large subunit pseudouridine synthase, RluD subfamily (EC:4.2.1.70)
Pseudouridine synthase Tax=GWD2_OD1_52_7
Pseudouridine synthase
gwd2_scaffold_1084_15
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

14219..14791
-----------------
DNA (573bp)
protein (191aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000313|EMBL:KKW30903.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
Cytidylate kinase
gwd2_scaffold_1084_16
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


14819..15160
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L19 {ECO:0000313|EMBL:KKW30904.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
rplS; 50S ribosomal protein L19
50S ribosomal protein L19
gwd2_scaffold_1084_17
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15205..16554)
-----------------
DNA (1350bp)
protein (450aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_18
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16535..17350)
-----------------
DNA (816bp)
protein (272aa)
DSBA-like thioredoxin domain-containing protein Tax=GWD2_OD1_52_7
DSBA oxidoreductase
DSBA-like thioredoxin domain-containing protein
gwd2_scaffold_1084_19
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

17365..17655
-----------------
DNA (291bp)
protein (97aa)
Preprotein translocase, SecG subunit Tax=GWD2_OD1_52_7
secG; preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit
gwd2_scaffold_1084_20
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

17782..19488
-----------------
DNA (1707bp)
protein (569aa)
Extracellular solute-binding protein family 5 Tax=GWD2_OD1_52_7
putative Extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5
gwd2_scaffold_1084_21
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

19812..21710
-----------------
DNA (1899bp)
protein (633aa)
RNA-metabolising metallo-beta-lactamase Tax=GWD2_OD1_52_7
beta-lactamase
RNA-metabolising metallo-beta-lactamase
gwd2_scaffold_1084_22
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

21776..23209
-----------------
DNA (1434bp)
protein (478aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_23
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

23219..23926
-----------------
DNA (708bp)
protein (236aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKW30911.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
Tryptophan--tRNA ligase
gwd2_scaffold_1084_24
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

23938..24183
-----------------
DNA (246bp)
protein (82aa)
tryptophanyl-tRNA ligase (EC:6.1.1.2)
Tryptophanyl-tRNA ligase {ECO:0000313|EMBL:KKW30912.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWD2_52_7.;"
Tryptophanyl-tRNA ligase
gwd2_scaffold_1084_25
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24374..24847)
-----------------
DNA (474bp)
protein (158aa)
Tax=GWD2_OD1_52_7
gwd2_scaffold_1084_26
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24919..25338)
-----------------
DNA (420bp)
protein (140aa)
Nucleotidyl transferase Tax=GWD2_OD1_52_7
nucleotidyl transferase
Nucleotidyl transferase
gwd2_scaffold_1084_27
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

25379..25708
-----------------
DNA (330bp)
protein (110aa)
Tax=GWD2_OD1_52_7
Displaying 27 items

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