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This organism can only be binned in the context of its binning project GWA1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwa1_scaffold_1482

Alias: GWA1_ZB2_49_26_9

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa1_scaffold_1482_1

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1..483
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW08302.1}; Flags: Fragment;; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
hypothetical protein
Putative uncharacterized protein
gwa1_scaffold_1482_2

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536..1306
-----------------
DNA (771bp)
protein (257aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KKW08303.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR
gwa1_scaffold_1482_3

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1439..1639
-----------------
DNA (201bp)
protein (67aa)
Cold shock-like protein {ECO:0000313|EMBL:KKW13304.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
hypothetical protein
Cold shock-like protein
gwa1_scaffold_1482_4

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comp(1695..2906)
-----------------
DNA (1212bp)
protein (404aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKW08305.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RNA polymerase, sigma 38 subunit, RpoS
RNA polymerase sigma factor
gwa1_scaffold_1482_5
GWC1_OD1_48_11, Yanofskybacteria, Parcubacteria, Bacteria

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comp(2919..4706)
-----------------
DNA (1788bp)
protein (596aa)
Primase protein {ECO:0000313|EMBL:KKU92790.1}; TaxID=1619027 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC1_48_11.;"
DNA primase
DNA primase
gwa1_scaffold_1482_6
GWB1_OD1_49_12, Parcubacteria, Bacteria

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comp(4711..5547)
-----------------
DNA (837bp)
protein (279aa)
Tax=GWB1_OD1_49_12
gwa1_scaffold_1482_7

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comp(5558..5938)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW13308.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
hypothetical protein
Putative membrane protein
gwa1_scaffold_1482_8

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comp(5935..6246)
-----------------
DNA (312bp)
protein (104aa)
Recombinase {ECO:0000313|EMBL:KKW08309.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
recombinase
Recombinase
gwa1_scaffold_1482_9

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comp(6256..6843)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW08310.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
Uncharacterized protein
gwa1_scaffold_1482_10
GWB1_OD1_49_12, Parcubacteria, Bacteria

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comp(6840..7700)
-----------------
DNA (861bp)
protein (287aa)
Protease HtpX homolog Tax=GWB1_OD1_49_12
Zn-dependent protease with chaperone function
Protease HtpX homolog
gwa1_scaffold_1482_11
GWB1_OD1_49_12, Parcubacteria, Bacteria

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comp(7909..8523)
-----------------
DNA (615bp)
protein (205aa)
LemA family protein Tax=GWB1_OD1_49_12
LemA family protein
LemA family protein
gwa1_scaffold_1482_12

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comp(8648..10279)
-----------------
DNA (1632bp)
protein (544aa)
60 kDa chaperonin {ECO:0000313|EMBL:KKW08313.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
groEL; molecular chaperone GroEL
60 kDa chaperonin
gwa1_scaffold_1482_13

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comp(10295..10585)
-----------------
DNA (291bp)
protein (97aa)
10 kDa chaperonin {ECO:0000313|EMBL:KKW08314.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
molecular chaperone GroES
10 kDa chaperonin
gwa1_scaffold_1482_14

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comp(10716..13550)
-----------------
DNA (2835bp)
protein (945aa)
UvrABC system protein A {ECO:0000313|EMBL:KKW08315.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
excinuclease ABC subunit A
UvrABC system protein A
gwa1_scaffold_1482_15

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13689..13922
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW08316.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
gwa1_scaffold_1482_16

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14190..15512
-----------------
DNA (1323bp)
protein (441aa)
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:KKW08317.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
putative excinuclease ABC, C subunit domain protein
Excinuclease ABC C subunit domain protein
gwa1_scaffold_1482_17

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15523..15873
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW08318.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
membrane protein
Putative uncharacterized protein
gwa1_scaffold_1482_18

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15880..16110
-----------------
DNA (231bp)
protein (77aa)
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:KKW08319.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
preprotein translocase subunit SecG
Preprotein translocase, SecG subunit
gwa1_scaffold_1482_19
GWB1_OD1_49_12, Parcubacteria, Bacteria

Not on your lists

16115..18127
-----------------
DNA (2013bp)
protein (671aa)
Extracellular solute-binding protein Tax=GWB1_OD1_49_12
family 5 extracellular solute-binding protein
Extracellular solute-binding protein
gwa1_scaffold_1482_20

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18270..19973
-----------------
DNA (1704bp)
protein (568aa)
rnjA; ribonuclease J 1 (EC:3.1.-.-)
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKW08321.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
RNA-metabolising metallo-beta-lactamase
gwa1_scaffold_1482_21

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20017..20967
-----------------
DNA (951bp)
protein (317aa)
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKW08322.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
Tryptophan--tRNA ligase
gwa1_scaffold_1482_22

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comp(20978..21772)
-----------------
DNA (795bp)
protein (265aa)
HAD superfamily hydrolase {ECO:0000313|EMBL:KKW08323.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
HAD superfamily hydrolase
gwa1_scaffold_1482_23

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21881..22294
-----------------
DNA (414bp)
protein (138aa)
30S ribosomal protein S6 {ECO:0000313|EMBL:KKW08324.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
30S ribosomal protein S6
gwa1_scaffold_1482_24

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22304..22756
-----------------
DNA (453bp)
protein (151aa)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKW08325.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
single-strand binding protein (Ssb)
Single-stranded DNA-binding protein
gwa1_scaffold_1482_25

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22757..22954
-----------------
DNA (198bp)
protein (66aa)
30S ribosomal protein S18 {ECO:0000313|EMBL:KKW13793.1}; TaxID=1618853 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_50_10.;"
hypothetical protein
30S ribosomal protein S18
gwa1_scaffold_1482_26

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comp(22925..24541)
-----------------
DNA (1617bp)
protein (539aa)
Protein RecA {ECO:0000313|EMBL:KKW08327.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
recombinase A
Protein RecA
gwa1_scaffold_1482_27

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comp(24543..25787)
-----------------
DNA (1245bp)
protein (415aa)
modification methylase MjaI (EC:2.1.1.113)
Modification methylase MjaI {ECO:0000313|EMBL:KKW08328.1}; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
Modification methylase MjaI
gwa1_scaffold_1482_28

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comp(25836..26057)
-----------------
DNA (222bp)
protein (74aa)
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:KKW08329.1}; Flags: Fragment;; TaxID=1618797 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
DNA translocase FtsK
Cell divisionFtsK/SpoIIIE (Fragment)
Displaying 28 items

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