ggKbase home page
This organism can only be binned in the context of its binning project GWE2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwe2_scaffold_1402

Alias: GWE2_WWE3_42_25_15

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe2_scaffold_1402_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

204..473
-----------------
DNA (270bp)
protein (90aa)
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KKS02613.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Transcriptional regulator, ArsR family
gwe2_scaffold_1402_2
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

470..1087
-----------------
DNA (618bp)
protein (206aa)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKS02614.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
glutaredoxin
Glutaredoxin-like protein, YruB-family
gwe2_scaffold_1402_3
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(1076..1570)
-----------------
DNA (495bp)
protein (165aa)
Phosphotyrosine protein phosphatases I 2..140 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwe2_scaffold_1402_4
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(1604..2413)
-----------------
DNA (810bp)
protein (270aa)
Bifunctional protein FolD {ECO:0000313|EMBL:KKS02616.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Bifunctional protein FolD
gwe2_scaffold_1402_5
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(2763..3485)
-----------------
DNA (723bp)
protein (241aa)
Peptidase, M50 family {ECO:0000313|EMBL:KKS02617.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
peptidase M50
Peptidase, M50 family
gwe2_scaffold_1402_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3660..4286
-----------------
DNA (627bp)
protein (209aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Transcription antitermination protein nusG
gwe2_scaffold_1402_7
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


4312..4752
-----------------
DNA (441bp)
protein (147aa)
50S ribosomal protein L11 {ECO:0000313|EMBL:KKS02619.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
50S ribosomal protein L11
gwe2_scaffold_1402_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


4757..5383
-----------------
DNA (627bp)
protein (209aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplA; 50S ribosomal protein L1
50S ribosomal protein L1
gwe2_scaffold_1402_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(5423..5683)
-----------------
DNA (261bp)
protein (87aa)
ATPase, F1 complex, delta/epsilon subunit, N-terminal 9..83 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
ATP synthase epsilon chain
gwe2_scaffold_1402_10
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(5691..7076)
-----------------
DNA (1386bp)
protein (462aa)
ATP synthase subunit beta {ECO:0000313|EMBL:KKS02622.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
ATP synthase subunit beta
gwe2_scaffold_1402_11
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(7067..7924)
-----------------
DNA (858bp)
protein (286aa)
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
atpG; ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain
gwe2_scaffold_1402_12
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(7927..9432)
-----------------
DNA (1506bp)
protein (502aa)
ATP synthase subunit alpha {ECO:0000313|EMBL:KKS02624.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
ATP synthase subunit alpha
gwe2_scaffold_1402_13
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(9432..9905)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwe2_scaffold_1402_14
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(9912..10658)
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS02626.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwe2_scaffold_1402_15
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(10668..11522)
-----------------
DNA (855bp)
protein (285aa)
transmembrane_regions 191..213 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwe2_scaffold_1402_16
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(11838..12068)
-----------------
DNA (231bp)
protein (77aa)
Tax=RIFOXYC1_FULL_WWE3_42_17_curated
gwe2_scaffold_1402_17
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

12491..15289
-----------------
DNA (2799bp)
protein (933aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
yapH; YapH protein
Putative uncharacterized protein
gwe2_scaffold_1402_18
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

15309..15533
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
yapH; YapH protein
Displaying 18 items

View Taxonomy