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gwc1_scaffold_9243_4

Organism: GWC1_CPR2_39_9

near complete RP 49 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38 MC: 3
Location: comp(2096..2953)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein Tax=GWC2_CPR2_39_10 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 605
  • Evalue 4.50e-170
alpha-amylase KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 240.0
  • Bit_score: 80
  • Evalue 1.00e-12
Putative lipoprotein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 79
  • Evalue 1.00e+00

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Notes

Extracellular- one domain matches to Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain [Cell wall/membrane/envelope biogenesis] and the second domain:Malarial early transcribed membrane protein (ETRAMP) ;These sequences represent a family of proteins from the malaria parasite Plasmodium falciparum, several of which have been shown to be expressed specifically in the ring stage as well as the rodent parasite Plasmodium yoelii. Cindy Castelle (4/23/17)

Taxonomy

GWC2_CPR2_39_10 → CPR2 → Bacteria

Sequences

DNA sequence
Length: 858
ATGGAAGAAAAACCTAAAATAACAGATCTAATCAAAAAACATGCCTCAAATAAGATATTTGTTATTAGCGCGGCTGCCTTTATTTTAATCTTGCTAGCCGGCACCGGAACGCATTATTATTTAAACGCCAAAAAAGAGAGAAACGAAACAAAAGACAAAATAACTGCAGGGGTTACTCCCACACCAACAGCCGCCCCAACCTTCGCACCCGCACCGTCAGCCACACCAACCACAACGCCAACCCCCGCGGCCGCACCTACCGCAAAGCCAACTCCCAAAGCTACGGCCACACCTGTTCCAACACCCACGCCTCAAGCCAGGCCTGTTCTTTATCTGCCTTTCGCCCAGGCCAATGATTCTGCCGGTCTTATCCCTATGGGCGAAACCGTTTATCATCCAAAACCATCAAACCCTTACGGCCATGGGGGGATTGATTTCCAATGGAACAGCAATATTCCAATAACGGCCGCCTTAGCCGGAACTGTTGACGGCATTTATGTCGGCTACCATCCCAATACCTGGGATGTTGTAGTAAAAACCGGGAAATATGCTGTTGGATACTACGAGCTAGAATCTTACAATCCGTCTCTTTCCGTTGGCAGTCCGGTAAGTGTCGGCACCTTTATTGGCTATCCGCAGCATCCCGGCGGTACCCACGAAGGCTATAGAATGATTCACTGGGAGTTTGGCTATTGGAACTCGACCTATCCTCGCTACGTCAATCGTTTCTGTCCCATGACTTATTTTGAAAGCGCATCAAAAGTAAGAATAGAAAACATTTGGGCCGCCACGCAGTGGGAGCATAAAAGTTCTTTCCCATACATCTGCAGCGGGGATTACTACAGTATGAATCAGTAA
PROTEIN sequence
Length: 286
MEEKPKITDLIKKHASNKIFVISAAAFILILLAGTGTHYYLNAKKERNETKDKITAGVTPTPTAAPTFAPAPSATPTTTPTPAAAPTAKPTPKATATPVPTPTPQARPVLYLPFAQANDSAGLIPMGETVYHPKPSNPYGHGGIDFQWNSNIPITAALAGTVDGIYVGYHPNTWDVVVKTGKYAVGYYELESYNPSLSVGSPVSVGTFIGYPQHPGGTHEGYRMIHWEFGYWNSTYPRYVNRFCPMTYFESASKVRIENIWAATQWEHKSSFPYICSGDYYSMNQ*