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gwc1_scaffold_9243

Alias: GWC1_TM7-rel_39_9_52

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_9243_1
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..368)
DNA (366bp) protein (122aa)
prophage antirepressor Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
phage antirepressor protein
BRO family protein
gwc1_scaffold_9243_2
GWC2_CPR2_39_10, CPR2, Bacteria

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comp(401..796)
DNA (396bp) protein (132aa)
Prophage antirepressor {ECO:0000313|EMBL:KKQ94696.1}; Flags: Fragment;; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
hypothetical protein
Prophage antirepressor
gwc1_scaffold_9243_3
GWC2_CPR2_39_10, CPR2, Bacteria

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comp(844..1869)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein Tax=GWC2_CPR2_39_10
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_9243_4
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(2096..2953)
DNA (858bp) protein (286aa)
Putative lipoprotein Tax=GWC2_CPR2_39_10
alpha-amylase
Putative lipoprotein
Extracellular- one domain matches to Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain [Cell wall/membrane/envelope biogenesis] and the second domain:Malarial early transcribed membrane protein (ETRAMP) ;These sequences represent a family of proteins from the malaria parasite Plasmodium falciparum, several of which have been shown to be expressed specifically in the ring stage as well as the rodent parasite Plasmodium yoelii. Cindy Castelle (4/23/17)
gwc1_scaffold_9243_5
GWC2_CPR2_39_10, CPR2, Bacteria

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3171..3434
DNA (264bp) protein (88aa)
RNA polymerase sigma factor Tax=GWC2_CPR2_39_10
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family
gwc1_scaffold_9243_6
GWC2_CPR2_39_10, CPR2, Bacteria

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3471..4004
DNA (534bp) protein (178aa)
Tax=GWC2_CPR2_39_10
gwc1_scaffold_9243_7
GWC2_CPR2_39_10, CPR2, Bacteria

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4074..4547
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=GWC2_CPR2_39_10
Putative uncharacterized protein
gwc1_scaffold_9243_8
GWC2_CPR2_39_10, CPR2, Bacteria

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4854..6053
DNA (1200bp) protein (400aa)
Putative uncharacterized protein Tax=GWC2_CPR2_39_10
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_9243_9
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

6079..6582
DNA (504bp) protein (168aa)
Tax=GWC2_CPR2_39_10
gwc1_scaffold_9243_10
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

6582..7778
DNA (1197bp) protein (399aa)
Efflux transporter, RND family, MFP subunit Tax=GWC2_CPR2_39_10
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit
gwc1_scaffold_9243_11
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

7778..8437
DNA (660bp) protein (220aa)
ABC transporter related protein {ECO:0000313|EMBL:KKQ94705.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
ABC transporter
ABC transporter related protein
gwc1_scaffold_9243_12
unknown

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8603..8740
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 12 items

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