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gwc1_scaffold_397

Alias: GWC1_CP_38_17_4

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_397_1

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2..511
-----------------
DNA (510bp)
protein (170aa)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KKP97453.1}; TaxID=1618919 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
metal dependent phophohydrolase
Metal dependent phophohydrolase
gwc1_scaffold_397_2
GWC1_OD1_38_17, Parcubacteria, Bacteria

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573..1163
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58637.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_3
GWC1_OD1_38_17, Parcubacteria, Bacteria

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comp(1266..1556)
-----------------
DNA (291bp)
protein (97aa)
Tax=GWC1_OD1_38_17
gwc1_scaffold_397_4
GWC1_OD1_38_17, Parcubacteria, Bacteria

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1726..2259
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58639.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
Hypothetical conserved protein alias=GW2011A_4_69 id=5801799 tax=GW2011_OD1_1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
gwc1_scaffold_397_5
GWC1_OD1_38_17, Parcubacteria, Bacteria

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2398..2895
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58640.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
hypothetical protein
hypothetical protein alias=ACD78_C00042G00007,ACD78_32825.15558.11G0007,ACD78_32825.15558.11_7 id=123600 tax=ACD78 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5
gwc1_scaffold_397_6
GWC1_OD1_38_17, Parcubacteria, Bacteria

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3619..5121
-----------------
DNA (1503bp)
protein (501aa)
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKQ58641.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
protein-export membrane protein SecD
Preprotein translocase subunit SecD
gwc1_scaffold_397_7

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5287..6153
-----------------
DNA (867bp)
protein (289aa)
Protein translocase subunit SecF {ECO:0000313|EMBL:KKQ51006.1}; TaxID=1618942 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_38_12.;"
protein-export membrane protein SecF
hypothetical protein alias=GW2011A_7_16 id=5801899 tax=GW2011_OD1_1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi
gwc1_scaffold_397_8
GWC1_OD1_38_17, Parcubacteria, Bacteria

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6203..6547
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58643.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_9
GWC1_OD1_38_17, Parcubacteria, Bacteria

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6713..6856
-----------------
DNA (144bp)
protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58644.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
transmembrane_regions 33..55 alias=ACD5p_1408.13062.90G0017,ACD5p_1408.13062.90_17,ACD1_C00069G00017 id=17652 tax=ACD1 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_397_10

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6860..7405
-----------------
DNA (546bp)
protein (182aa)
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKQ51003.1}; TaxID=1618942 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_38_12.;"
nusG; transcription antitermination factor
NusG antitermination factor; K02601 transcriptional antiterminator NusG alias=ACD63_C00046G00032,ACD63_44767.28128.9G0032,ACD63_44767.28128.9_32 id=96199 tax=ACD63 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_397_11
GWC1_OD1_38_17, Parcubacteria, Bacteria

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7510..7935
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L11 {ECO:0000313|EMBL:KKQ58646.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
rplK; 50S ribosomal protein L11
50S ribosomal protein L11
gwc1_scaffold_397_12
GWC1_OD1_38_17, Parcubacteria, Bacteria

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8058..8765
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58647.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_13
GWC1_OD1_38_17, Parcubacteria, Bacteria

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8765..9424
-----------------
DNA (660bp)
protein (220aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Putative thymidylate kinase {ECO:0000313|EMBL:KKQ58648.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
Probable thymidylate kinase
gwc1_scaffold_397_14
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

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9506..10975
-----------------
DNA (1470bp)
protein (490aa)
tjr:TherJR_0872 glutamyl-tRNA(Gln) amidotransferase, B subunit; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] alias=ACD15_10375.40630.16G0022,ACD15_10375.40630.16_22,ACD15_C00052G00022 id=9030 tax=ACD15 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000313|EMBL:KKQ42440.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
glutamyl-tRNA(Gln) amidotransferase subunit B
gwc1_scaffold_397_15
GWC1_OD1_38_17, Parcubacteria, Bacteria

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11054..11347
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58650.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_16
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

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comp(11355..12314)
-----------------
DNA (960bp)
protein (320aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Geobacter sp. M18 RepID=C6MSV0_9DELT alias=ACD81_3195.23262.55G0003,ACD81_3195.23262.55_3,ACD81_C00024G00003 id=133465 tax=ACD81 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
tRNA dimethylallyltransferase {ECO:0000313|EMBL:KKQ42442.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
gwc1_scaffold_397_17
GWC1_OD1_38_17, Parcubacteria, Bacteria

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12425..13033
-----------------
DNA (609bp)
protein (203aa)
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase Tax=GWC1_OD1_38_17
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase
gwc1_scaffold_397_18
GWC1_OD1_38_17, Parcubacteria, Bacteria

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13147..13590
-----------------
DNA (444bp)
protein (148aa)
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:KKQ58653.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
AsnC family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family
gwc1_scaffold_397_19

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13596..14810
-----------------
DNA (1215bp)
protein (405aa)
cth:Cthe_0720 aminotransferase, class V; K04487 cysteine desulfurase [EC:2.8.1.7] alias=ACD18_11569.7448.21G0006,ACD18_11569.7448.21_6,ACD18_C00079G00006 id=13669 tax=ACD18 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc= OD1
Cysteine desulfurase {ECO:0000313|EMBL:KKP98362.1}; TaxID=1618919 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
aminotransferase, class V superfamily
gwc1_scaffold_397_20
GWC1_OD1_38_17, Parcubacteria, Bacteria

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14977..15675
-----------------
DNA (699bp)
protein (233aa)
nitrogen-fixing NifU domain protein; K13819 NifU-like protein Tax=GWC1_OD1_38_17
nitrogen-fixing NifU domain-containing protein
nitrogen-fixing NifU domain protein; K13819 NifU-like protein alias=ACD18_11569.7448.21G0007,ACD18_11569.7448.21_7,ACD18_C00079G00007 id=13667 tax=ACD18 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc= OD1
gwc1_scaffold_397_21

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15803..16078
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ59441.1}; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
transmembrane_regions 5..27 alias=ACD15_20631.25462.16_12,ACD15_20631.25462.16G0012,ACD15_C00030G00012 id=8609 tax=ACD15 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_397_22
GWC1_OD1_38_17, Parcubacteria, Bacteria

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16089..17063
-----------------
DNA (975bp)
protein (325aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000313|EMBL:KKQ58657.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
UDP-N-acetylenolpyruvoylglucosamine reductase
gwc1_scaffold_397_23
GWC1_OD1_38_17, Parcubacteria, Bacteria

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17237..17476
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58658.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_24
GWC1_OD1_38_17, Parcubacteria, Bacteria

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17564..17941
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58659.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_25

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18117..18551
-----------------
DNA (435bp)
protein (145aa)
Protein mraZ n=4 Tax=Enterococcus RepID=C9A0X0_ENTGA alias=ACD11_C00006G00253,ACD11_12498.357805.29G0253,ACD11_12498.357805.29_253 id=2749 tax=ACD11 species=unknown genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Protein MraZ {ECO:0000313|EMBL:KKQ59437.1}; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
mraZ; protein MraZ
gwc1_scaffold_397_26
GWC1_OD1_38_17, Parcubacteria, Bacteria

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18894..19703
-----------------
DNA (810bp)
protein (270aa)
S-adenosyl-methyltransferase MraW, S-adenosyl-methyltransferase {ECO:0000313|EMBL:KKQ58661.1}; EC=2.1.1.- {ECO:0000313|EMBL:KKQ58661.1};; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parc
mraW; S-adenosyl-methyltransferase MraW; K03438 S-adenosyl-methyltransferase [EC:2.1.1.-] alias=ACD81_C00005G00014,ACD81_2456.18783.58G0014,ACD81_2456.18783.58_14 id=133080 tax=ACD81 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
S-adenosyl-methyltransferase MraW
gwc1_scaffold_397_27
GWC1_OD1_38_17, Parcubacteria, Bacteria

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19741..20124
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58662.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
gwc1_scaffold_397_28

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20224..21948
-----------------
DNA (1725bp)
protein (575aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
ttr:Tter_1614 peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] alias=ACD15_2912.11501.15G0010,ACD15_2912.11501.15_10,ACD15_C00040G00010 id=8795 tax=ACD15 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KKQ59434.1}; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
gwc1_scaffold_397_29
GWC1_OD1_38_17, Parcubacteria, Bacteria

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22043..23341
-----------------
DNA (1299bp)
protein (433aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase, UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKQ58664.1}; EC=6.3.2.10 {ECO:0000313|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase [EC:6.3.2.10] alias=ACD9_566.4710.9G0003,ACD9_566.4710.9_3,ACD9_C00005G00003 id=137424 tax=ACD9 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
gwc1_scaffold_397_30
GWC1_OD1_38_17, Parcubacteria, Bacteria

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23440..23715
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ58665.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
Displaying items 1-30 of 46 in total

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