ggKbase home page

gwc1_scaffold_1069

Alias: GWC1_OD1_44_10_9

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1069_1
R_RIF_OD1_10_46_25, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
transmembrane_regions Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_46_25_curated
gwc1_scaffold_1069_2

Not on your lists

comp(111..1106)
DNA (996bp) protein (332aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKT29587.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RNA-directed DNA polymerase Reverse transcriptase
Retron-type reverse transcriptase
gwc1_scaffold_1069_3

Not on your lists

comp(1404..1892)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30134.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_4

Not on your lists

comp(1901..2977)
DNA (1077bp) protein (359aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKU30133.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
dnaJ; chaperone protein DnaJ
Chaperone protein DnaJ
gwc1_scaffold_1069_5

Not on your lists

comp(2974..3546)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30132.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_1069_6
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3550..5430)
DNA (1881bp) protein (627aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
molecular chaperone DnaK
Chaperone protein DnaK
gwc1_scaffold_1069_7

Not on your lists

comp(5467..6537)
DNA (1071bp) protein (357aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30130.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_8

Not on your lists

comp(6534..7043)
DNA (510bp) protein (170aa)
Protein GrpE {ECO:0000313|EMBL:KKU30129.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
GrpE protein
Protein GrpE
gwc1_scaffold_1069_9

Not on your lists

comp(7021..7758)
DNA (738bp) protein (246aa)
Heat-inducible transcription repressor hrcA {ECO:0000313|EMBL:KKU30128.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor hrcA
gwc1_scaffold_1069_10

Not on your lists

comp(7943..8353)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30127.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_11

Not on your lists

comp(8356..8541)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30126.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_12

Not on your lists


comp(8636..9082)
DNA (447bp) protein (149aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKU30125.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9
gwc1_scaffold_1069_13

Not on your lists


comp(9066..9410)
DNA (345bp) protein (115aa)
50S ribosomal protein L13 {ECO:0000313|EMBL:KKU30124.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
50S ribosomal protein L13
50S ribosomal protein L13
gwc1_scaffold_1069_14

Not on your lists


comp(9433..9699)
DNA (267bp) protein (89aa)
50S ribosomal protein L17 {ECO:0000313|EMBL:KKT29599.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17
gwc1_scaffold_1069_15
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9782..10684)
DNA (903bp) protein (301aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT60004.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha
gwc1_scaffold_1069_16

Not on your lists


comp(10702..11268)
DNA (567bp) protein (189aa)
30S ribosomal protein S4 {ECO:0000313|EMBL:KKT29601.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
30S ribosomal protein S4
30S ribosomal protein S4
gwc1_scaffold_1069_17

Not on your lists


comp(11307..11741)
DNA (435bp) protein (145aa)
Ribosomal protein S11 {ECO:0000313|EMBL:KKT29602.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
rpsK; 30S ribosomal protein S11
Ribosomal protein S11
gwc1_scaffold_1069_18
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(11924..12310)
DNA (387bp) protein (129aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKT60001.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13
gwc1_scaffold_1069_19
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(12430..12651)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 {ECO:0000313|EMBL:KKT60000.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
translation initiation factor IF-1
Translation initiation factor IF-1
gwc1_scaffold_1069_20

Not on your lists

comp(12707..12976)
DNA (270bp) protein (90aa)
Plasmid stabilization system {ECO:0000313|EMBL:KKU30117.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RelE/StbE family addiction module toxin
Plasmid stabilization system
gwc1_scaffold_1069_21

Not on your lists

comp(12960..13175)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30116.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_22
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(13192..14481)
DNA (1290bp) protein (430aa)
seg Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
gwc1_scaffold_1069_23

Not on your lists

comp(14478..15650)
DNA (1173bp) protein (391aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29608.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
gwc1_scaffold_1069_24

Not on your lists

comp(15667..16980)
DNA (1314bp) protein (438aa)
Acetylornithine aminotransferase {ECO:0000313|EMBL:KKU30113.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
4-aminobutyrate aminotransferase
Acetylornithine aminotransferase
gwc1_scaffold_1069_25

Not on your lists

17164..17469
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30112.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_26

Not on your lists

17699..18268
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30111.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
phaN; repressor
ORF13
gwc1_scaffold_1069_27

Not on your lists


comp(18346..20106)
DNA (1761bp) protein (587aa)
Alanine-tRNA ligase {ECO:0000313|EMBL:KKT29612.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Alanine-tRNA ligase
Alanine--tRNA ligase
gwc1_scaffold_1069_28

Not on your lists

comp(20103..21281)
DNA (1179bp) protein (393aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000313|EMBL:KKT29613.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
tRNA-specific 2-thiouridylase MnmA
gwc1_scaffold_1069_29

Not on your lists

21334..21681
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30108.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gwc1_scaffold_1069_30

Not on your lists

comp(21783..22052)
DNA (270bp) protein (90aa)
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKU30107.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
ArsR family transcriptional regulator
Displaying 30 items

View Taxonomy