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gwc1_scaffold_6432_1

Organism: GWC1_OD1_44_26_partial

partial RP 26 / 55 MC: 1 BSCG 33 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(1..1266)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 38 subunit, RpoS, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKT60314.1}; Flags: Fragment;; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bac UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 422.0
  • Bit_score: 823
  • Evalue 1.20e-235
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 418.0
  • Bit_score: 373
  • Evalue 6.60e-101
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
  • Identity: 72.6
  • Coverage: null
  • Bit_score: 475
  • Evalue 1.40e-131

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCCGAAAAAAACTACAAATAAAAGTTCACGTCCAAGACGAGAATCTGCTGATTCTAGAATCCACACGAAACCAGTAGTAAAGAAAACTGCAAAAAAACCAGTAAAAAAAGCTGTCGTTAAGAAGGTGGCAAAAAAAGTAGCCTATAAAAAAGCCGTTCCCAAAAAGGCACCAGCAAAGGCAAAAAAGCCAGTTGCAAAGAAAAAATCAACTGAAGGTTGGGAGCAAAAAGCGCAAATTCTTATTCTCAAGGGTCGCGGTCGCGGGTTCATAACATACAACGAAATTCTTAAGGAATTTCCTATGGTGGAGCAGGATGTGATTTTTCTAGATACACTGTATGAAAAACTCGGTGATGCTGGCGTGGACATACTTGAAAGTGGCGGTCTTTTAAACCTTGAGCCAGAGGAAGTTTTAACTCATAAAAAATACACATACAAAAGCGGTGACTCCTCGTATGACTCTATTCAAATGTATTTGAAAGAGATTGGTCAGTACCCGCTTCTTACAGCTGGGGAGGAGCGTGATCTTGCTCAGCGTATTCAGATGGGGGACGAGGAAGGCAAAAACCTTCTCGCTCGCGCGAACCTTCGTCTCGTGGTTTCCATCGCTAAAAAATATGTTGGCAGAAGCGCTGACCTCACTCTCCTAGACCTTATTCAGGAGGGTAATATCGGCCTATTTAAAGCAGTGGAAAAGTTTGATTGGGAGAAGGGTTACAAGTTTTCAACATACGCAACGTGGTGGATTCGACAGGCTATCACACGCGCCCTCGCGGACCAGTCGCGTACTATCCGCATCCCAGTGCACATGGTGGAAACTATTTCAAAGTACAAGCAAGTGGTGCGTCGCTTGTCACAGGATCTTGGTCGTGAACCGCTTCCAGGAGAGGTTGCCACAGAGATGGGTCTTGATGTGGAGAAGATTTACAACATTAAGAAAATTGACCAAGACACCGTCTCTCTTGAAAAGCCGATTGGAGATGATGATGACAAATCAACGCTGGGTGAATTTATTGCCGATGACAAAATTCTTTCTCCTGCGCAGGATTCAGCTCAGAGAATTCTATCTGACCAAGTGAAAGAAATTTTGAACGACCTTTCTGAAAAGGAGCGAAAGATTCTGGAGCTTAGGCACGGACTTGTGGATGGCGTAGTCCACACTCTTGAAGAAGTGGGCCGAGAGTTCCAGGTGACTCGTGAACGTATCAGACAGATTGAAGCAAAAGCGATTGAGAAGATTCGCGCGCACGACAAGGTGGATAAG
PROTEIN sequence
Length: 422
MPKKTTNKSSRPRRESADSRIHTKPVVKKTAKKPVKKAVVKKVAKKVAYKKAVPKKAPAKAKKPVAKKKSTEGWEQKAQILILKGRGRGFITYNEILKEFPMVEQDVIFLDTLYEKLGDAGVDILESGGLLNLEPEEVLTHKKYTYKSGDSSYDSIQMYLKEIGQYPLLTAGEERDLAQRIQMGDEEGKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNIGLFKAVEKFDWEKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPGEVATEMGLDVEKIYNIKKIDQDTVSLEKPIGDDDDKSTLGEFIADDKILSPAQDSAQRILSDQVKEILNDLSEKERKILELRHGLVDGVVHTLEEVGREFQVTRERIRQIEAKAIEKIRAHDKVDK