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gwc1_scaffold_6432

Alias: GWC1_OD1_44_26_partial_14

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_6432_1

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comp(1..1266)
-----------------
DNA (1266bp)
protein (422aa)
RNA polymerase, sigma 38 subunit, RpoS, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKT60314.1}; Flags: Fragment;; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bac
RpoD subfamily RNA polymerase sigma-70 subunit
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
gwc1_scaffold_6432_2

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comp(1269..1550)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT60315.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
gwc1_scaffold_6432_3

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comp(1519..2964)
-----------------
DNA (1446bp)
protein (482aa)
Primase protein {ECO:0000313|EMBL:KKT60316.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
DNA primase
DNA primase
gwc1_scaffold_6432_4
GWD1_OD1_44_10_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(3069..6710)
-----------------
DNA (3642bp)
protein (1214aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKT30298.1}; TaxID=1618757 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWD1_44_10.;"
DNA-directed RNA polymerase subunit beta'
gwc1_scaffold_6432_5
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(6712..8442)
-----------------
DNA (1731bp)
protein (577aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKT38063.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
DNA-directed RNA polymerase subunit beta
gwc1_scaffold_6432_6

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comp(8430..9821)
-----------------
DNA (1392bp)
protein (464aa)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKT60319.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta
gwc1_scaffold_6432_7
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(10109..10366)
-----------------
DNA (258bp)
protein (86aa)
Tax=GWA1_OD1_44_13
gwc1_scaffold_6432_8
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(10482..10802)
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT38065.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Uncharacterized protein alias=gwe2_scaffold_363_95 id=1990273 tax=GWE2_OD1_ACD81_47_12 species=Acinetobacter baumannii OIFC087 genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
gwc1_scaffold_6432_9
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(10838..11131)
-----------------
DNA (294bp)
protein (98aa)
Tax=GWA1_OD1_44_13
gwc1_scaffold_6432_10
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(11331..11990)
-----------------
DNA (660bp)
protein (220aa)
Collagen triple helix repeat protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLP2_ACIAC
Collagen triple helix repeat Tax=GWA1_OD1_44_13
collagen alpha 2(I) chain
gwc1_scaffold_6432_11
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(12057..12314)
-----------------
DNA (258bp)
protein (86aa)
Tax=GWA1_OD1_44_13
gwc1_scaffold_6432_12
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(12311..12589)
-----------------
DNA (279bp)
protein (93aa)
Toxin-antitoxin system protein Tax=GWA1_OD1_44_13
RelB alias=ACD38_47761.17928.11G0008,ACD38_47761.17928.11_8,ACD38_C00019G00008 id=43420 tax=ACD38 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
gwc1_scaffold_6432_13

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comp(12650..13309)
-----------------
DNA (660bp)
protein (220aa)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKT60326.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
trmD; transfer RNA (guanine-N(1)-)-methyltransferase
tRNA (guanine-N(1)-)-methyltransferase
gwc1_scaffold_6432_14

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comp(13489..13800)
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT60327.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
hypothetical protein
UPF0109 protein LDC_0451
gwc1_scaffold_6432_15
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(13976..14416)
-----------------
DNA (441bp)
protein (147aa)
tde:TDE1659 alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] alias=ACD3_6.32582.71G0005,ACD3_6.32582.71_5,ACD3_C00028G00005 id=50155 tax=ACD3 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=BD1-5 organism_desc=BD1-5
Alanine-tRNA ligase {ECO:0000313|EMBL:KKT38072.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
hypothetical protein
Displaying 15 items

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