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gwc1_scaffold_1880

Alias: GWC1_OD1_39_8_partial_4

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1880_1
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

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1..315
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30917.1}; Flags: Fragment;; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_2
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

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498..785
-----------------
DNA (288bp)
protein (96aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1880_3
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

793..1284
-----------------
DNA (492bp)
protein (164aa)
general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
hypothetical protein
General secretion pathway protein G
gwc1_scaffold_1880_4
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

1302..1781
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30920.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_5
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

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comp(1782..2441)
-----------------
DNA (660bp)
protein (220aa)
ComF family protein {ECO:0000313|EMBL:KKR30921.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
phosphoribosyltransferase
comF family protein
gwc1_scaffold_1880_6
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

2469..3611
-----------------
DNA (1143bp)
protein (381aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM
gwc1_scaffold_1880_7
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

4066..4743
-----------------
DNA (678bp)
protein (226aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1880_8
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

4745..5290
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30924.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_9
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

5295..5588
-----------------
DNA (294bp)
protein (98aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1880_10
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

5591..7180
-----------------
DNA (1590bp)
protein (530aa)
Type II secretion system protein E {ECO:0000313|EMBL:KKR30926.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
type II secretion system protein E
type II secretion system protein E
gwc1_scaffold_1880_11
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

7170..7577
-----------------
DNA (408bp)
protein (136aa)
Response regulator {ECO:0000313|EMBL:KKR30927.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
Two component transcriptional regulator, winged helix
response regulator
gwc1_scaffold_1880_12
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

7579..8646
-----------------
DNA (1068bp)
protein (356aa)
Twitching motility protein {ECO:0000313|EMBL:KKQ83016.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
twitching motility protein PilT
twitching motility protein
gwc1_scaffold_1880_13
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

8686..9894
-----------------
DNA (1209bp)
protein (403aa)
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Type II secretion system F domain
Type II secretion system F domain
gwc1_scaffold_1880_14
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

9962..10438
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
hypothetical protein
Putative uncharacterized protein
gwc1_scaffold_1880_15
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10920..11282
-----------------
DNA (363bp)
protein (121aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1880_16
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

11266..11919
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30932.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_17
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

11919..12455
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30933.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_18
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

12479..13015
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30934.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_19
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

13032..13526
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30935.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1880_20
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

13553..15559
-----------------
DNA (2007bp)
protein (669aa)
Ligase protein {ECO:0000313|EMBL:KKR30936.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
DNA ligase
DNA ligase
Displaying 20 items

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