ggKbase home page

gwc1_scaffold_1936

Alias: GWC1_OD1_39_8_partial_5

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_1936_1
GWB1_OD1_57_6, Parcubacteria, Bacteria

Not on your lists

3..188
-----------------
DNA (186bp)
protein (62aa)
SsrA-binding protein {ECO:0000313|EMBL:KKW46615.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;"
SsrA-binding protein
SsrA-binding protein
gwc1_scaffold_1936_2
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(739..1062)
-----------------
DNA (324bp)
protein (108aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine-tRNA ligase {ECO:0000313|EMBL:KKR30875.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
Methionine--tRNA ligase
gwc1_scaffold_1936_3
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(1074..1298)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30876.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1936_4
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(1329..1946)
-----------------
DNA (618bp)
protein (206aa)
Putative pyruvoyl-dependent arginine decarboxylase {ECO:0000313|EMBL:KKR30877.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
putative pyruvoyl-dependent arginine decarboxylase
Probable pyruvoyl-dependent arginine decarboxylase
gwc1_scaffold_1936_5
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(1990..2445)
-----------------
DNA (456bp)
protein (152aa)
Membrane protein-like protein {ECO:0000313|EMBL:KKR30878.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
hypothetical protein
Membrane protein-like protein
gwc1_scaffold_1936_6
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

2493..2993
-----------------
DNA (501bp)
protein (167aa)
Translation initiation factor IF-3 {ECO:0000313|EMBL:KKR30879.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
translation initiation factor IF-3
Translation initiation factor IF-3
gwc1_scaffold_1936_7
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

3342..3533
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30880.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1936_8
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


3543..3890
-----------------
DNA (348bp)
protein (116aa)
50S ribosomal protein L20 {ECO:0000313|EMBL:KKR30881.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
50S ribosomal protein L20
50S ribosomal protein L20
gwc1_scaffold_1936_9
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(3871..4296)
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30882.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
gwc1_scaffold_1936_10
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

comp(4590..5198)
-----------------
DNA (609bp)
protein (203aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KKR30883.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
Nucleoside diphosphate kinase
gwc1_scaffold_1936_11
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(5191..5964)
-----------------
DNA (774bp)
protein (258aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000313|EMBL:KKQ83271.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
Methionine aminopeptidase
gwc1_scaffold_1936_12
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(5961..6503)
-----------------
DNA (543bp)
protein (181aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
adk; adenylate kinase
adenylate kinase
gwc1_scaffold_1936_13
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(6528..7799)
-----------------
DNA (1272bp)
protein (424aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY
gwc1_scaffold_1936_14
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(7806..8087)
-----------------
DNA (282bp)
protein (94aa)
50S ribosomal protein L15 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1936_15
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(8112..8711)
-----------------
DNA (600bp)
protein (200aa)
30S ribosomal protein S5 {ECO:0000313|EMBL:KKR30888.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5
gwc1_scaffold_1936_16
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(8714..9034)
-----------------
DNA (321bp)
protein (107aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
50S ribosomal protein L18
50S ribosomal protein L18
gwc1_scaffold_1936_17
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(9058..9591)
-----------------
DNA (534bp)
protein (178aa)
50S ribosomal protein L6 (EC:3.1.3.45)
50S ribosomal protein L6 {ECO:0000313|EMBL:KKR30890.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
50S ribosomal protein L6
gwc1_scaffold_1936_18
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(9596..10012)
-----------------
DNA (417bp)
protein (139aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:KKR30891.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rpsH; small subunit ribosomal protein S8
30S ribosomal protein S8
gwc1_scaffold_1936_19
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(10294..10806)
-----------------
DNA (513bp)
protein (171aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5
gwc1_scaffold_1936_20
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(10811..11044)
-----------------
DNA (234bp)
protein (78aa)
50S ribosomal protein L24 {ECO:0000313|EMBL:KKR30893.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rplX; 50S ribosomal protein L24
50S ribosomal protein L24
gwc1_scaffold_1936_21
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(11072..11443)
-----------------
DNA (372bp)
protein (124aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
50S ribosomal protein L14
50S ribosomal protein L14
gwc1_scaffold_1936_22
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(11453..11695)
-----------------
DNA (243bp)
protein (81aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17
gwc1_scaffold_1936_23
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(11702..11890)
-----------------
DNA (189bp)
protein (63aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
gwc1_scaffold_1936_24
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(11907..12323)
-----------------
DNA (417bp)
protein (139aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKR30897.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rplP; 50S ribosomal protein L16
50S ribosomal protein L16
gwc1_scaffold_1936_25
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(12329..12997)
-----------------
DNA (669bp)
protein (223aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
30S ribosomal protein S3
30S ribosomal protein S3
gwc1_scaffold_1936_26
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(13001..13360)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L22 {ECO:0000313|EMBL:KKR30899.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rplV; 50S ribosomal protein L22
50S ribosomal protein L22
gwc1_scaffold_1936_27
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(13372..13713)
-----------------
DNA (342bp)
protein (114aa)
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
rpsS; ribosomal protein S19 (BS19)
Ribosomal protein S19
gwc1_scaffold_1936_28
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(13876..14571)
-----------------
DNA (696bp)
protein (232aa)
small-conductance mechanosensitive ion channel Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
small-conductance mechanosensitive ion channel
Small-conductance mechanosensitive ion channel-like protein
gwc1_scaffold_1936_29
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(14721..15278)
-----------------
DNA (558bp)
protein (186aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
hypothetical protein
probable transcriptional regulator
gwc1_scaffold_1936_30
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists


comp(15360..15752)
-----------------
DNA (393bp)
protein (131aa)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKR30903.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
rplL; ribosomal protein L7/L12
50S ribosomal protein L7/L12
Displaying items 1-30 of 37 in total

View Taxonomy