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gwc1_scaffold_4834

Alias: GWC1_OD1_48_8_partial_14

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_4834_1
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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3..365
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU98768.1}; Flags: Fragment;; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
gwc1_scaffold_4834_2
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

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388..2505
-----------------
DNA (2118bp)
protein (706aa)
ATP-dependent DNA helicase Tax=GWB1_OD1_50_10
recG; ATP-dependent DNA helicase
ATP-dependent DNA helicase
gwc1_scaffold_4834_3
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(2506..3639)
-----------------
DNA (1134bp)
protein (378aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine-tRNA ligase {ECO:0000313|EMBL:KKW15381.1}; TaxID=1618665 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
Uncharacterized protein alias=gwe2_scaffold_265_52 id=1924376 tax=GWE2_OD1_40_11 species=Thalassiosira oceanica genus=Thalassiosira taxon_order=unknown taxon_class=Coscinodiscophyceae phylum=Bacillariophyta
gwc1_scaffold_4834_4
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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3983..4636
-----------------
DNA (654bp)
protein (218aa)
graD_6; sugar nucleotidyltransferase (glucose-1-phosphate thymidylyltransferase) 6 (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] alias=ACD5_7061.9986.10G0007,ACD5_7061.9986.10_7,ACD5_C00122G00007 id=88977 tax=ACD5 species=Natronomonas pharaonis genus=Natronomonas taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KKU98771.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
nucleotidyl transferase
gwc1_scaffold_4834_5
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(4621..5961)
-----------------
DNA (1341bp)
protein (447aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKU98772.1}; EC=6.3.5.- {ECO:0000313|EMBL:KKU98772.1};; EC=6.3.5.
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
chy:CHY_1102 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] alias=ACD81_25.11612.54G0004,ACD81_25.11612.54_4,ACD81_C00058G00004 id=133863 tax=ACD81 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_4834_6
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(6014..6256)
-----------------
DNA (243bp)
protein (81aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2EVE0_9LACO alias=ACD81_25.11612.54G0003,ACD81_25.11612.54_3,ACD81_C00058G00003 id=133862 tax=ACD81 species=Lactobacillus vaginalis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
Aspartyl/glutamyl-tRNA amidotransferase subunit C {ECO:0000313|EMBL:KKU98773.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.
gwc1_scaffold_4834_7
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(6305..8359)
-----------------
DNA (2055bp)
protein (685aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
Ligase protein {ECO:0000313|EMBL:KKU98774.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
DNA ligase
gwc1_scaffold_4834_8
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(8363..8710)
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU98775.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
gwc1_scaffold_4834_9
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(8758..9369)
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU98776.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
gwc1_scaffold_4834_10
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(9366..9881)
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU98777.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
gwc1_scaffold_4834_11
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(9888..10403)
-----------------
DNA (516bp)
protein (172aa)
Tax=GWB1_OD1_50_10
gwc1_scaffold_4834_12
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(10463..11362)
-----------------
DNA (900bp)
protein (300aa)
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, leader peptidase (Prepilin peptidase) / N-methyltransferase {ECO:0000313|EMBL:KKU98779.1}; EC=3.4.23.43 {ECO:0000313|E
pulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] alias=ACD81_C00038G00005,ACD81_281.7867.53G0005,ACD81_281.7867.53_5 id=133674 tax=ACD81 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
PulO; type II secretory pathway, prepilin signal peptidase PulO and related peptidases
gwc1_scaffold_4834_13
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(11364..11801)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU98780.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
type II secretion system protein G
transmembrane_regions 7..29 alias= id=87443 tax=ACD58 species=ACD58 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=ACD58 organism_desc=ACD58
gwc1_scaffold_4834_14
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(11806..12204)
-----------------
DNA (399bp)
protein (133aa)
Pilin domain-containing protein, general secretion pathway protein G {ECO:0000313|EMBL:KKU98781.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacteriu
hypothetical protein
pilin domain-containing protein; K02456 general secretion pathway protein G alias=ACD13_C00002G00038,ACD13_47017.65743.18G0038,ACD13_47017.65743.18_38 id=6089 tax=ACD13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_4834_15
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(12250..13455)
-----------------
DNA (1206bp)
protein (402aa)
Tfp pilus biogenesis protein PilC {ECO:0000313|EMBL:KKU94360.1}; TaxID=1618661 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
Tfp pilus biogenesis protein PilC
Type II secretion system F domain protein alias=gwe2_scaffold_198_48 id=1869351 tax=GWE2_OD1_ACD81_47_12 species=Bacillus selenitireducens MLS10 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
gwc1_scaffold_4834_16
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(13471..14061)
-----------------
DNA (591bp)
protein (197aa)
Twitching motility protein {ECO:0000313|EMBL:KKU98783.1}; TaxID=1618666 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
glutamate dehydrogenase
twitching motility protein alias=gwe2_scaffold_198_49 id=1869353 tax=GWE2_OD1_ACD81_47_12 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
Displaying 16 items

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