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gwc2_scaffold_3438

Alias: GWC2_OD1_49_9_19

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc2_scaffold_3438_1
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

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comp(7..975)
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15217.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
gwc2_scaffold_3438_2
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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comp(1602..3389)
-----------------
DNA (1788bp)
protein (596aa)
S-layer domain protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_3
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(3394..3924)
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15219.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Prepilin-type N-terminal cleavage/methylation domain-containing protein
gwc2_scaffold_3438_4
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3909..4520)
-----------------
DNA (612bp)
protein (204aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_5
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4523..4966)
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
hypothetical protein
Putative type IV pilus assembly protein FimT
gwc2_scaffold_3438_6
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(4971..6179)
-----------------
DNA (1209bp)
protein (403aa)
General secretory pathway component, cryptic {ECO:0000313|EMBL:KKW01376.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
gspF; general secretory pathway component, cryptic
General secretory pathway component, cryptic
gwc2_scaffold_3438_7
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(6185..7930)
-----------------
DNA (1746bp)
protein (582aa)
Putative ATPases involved in pili biogenesis, PilB-like protein s {ECO:0000313|EMBL:KKW15223.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Type II secretion system protein E
Predicted ATPases involved in pili biogenesis, PilB homologs
gwc2_scaffold_3438_8
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

8244..8924
-----------------
DNA (681bp)
protein (227aa)
pcm; protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
pcm; protein-L-isoaspartate O-methyltransferase
Protein-L-isoaspartate O-methyltransferase
gwc2_scaffold_3438_9
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

8957..10033
-----------------
DNA (1077bp)
protein (359aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13 2.7.7.22 5.3.1.8)
Mannose-1-phosphate guanylyltransferase (GDP), mannose-6-phosphate isomerase, type 2 {ECO:0000313|EMBL:KKW01373.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW
Mannose-1-phosphate guanylyltransferase (GDP) ;mannose-6-phosphate isomerase, type 2
gwc2_scaffold_3438_10
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

10015..11085
-----------------
DNA (1071bp)
protein (357aa)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KKW15226.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
aminodeoxychorismate lyase
Aminodeoxychorismate lyase
gwc2_scaffold_3438_11
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

11082..11768
-----------------
DNA (687bp)
protein (229aa)
putative uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
putative uridylate kinase
Putative uridylate kinase
gwc2_scaffold_3438_12
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(11758..12441)
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15228.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
lysophospholipase L2
Lysophospholipase L2, putative
gwc2_scaffold_3438_13
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

12742..13134
-----------------
DNA (393bp)
protein (131aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_14
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

13411..13737
-----------------
DNA (327bp)
protein (109aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_15
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists


13837..14529
-----------------
DNA (693bp)
protein (231aa)
50S ribosomal protein L10 {ECO:0000313|EMBL:KKW15231.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
50S ribosomal protein L10
50S ribosomal protein L10
gwc2_scaffold_3438_16
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

14567..14986
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKW15232.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
50S ribosomal protein L12
50S ribosomal protein L7/L12
gwc2_scaffold_3438_17
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(15062..17302)
-----------------
DNA (2241bp)
protein (747aa)
coiled-coil 411..439 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
hypothetical protein
gwc2_scaffold_3438_18
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

17418..17984
-----------------
DNA (567bp)
protein (189aa)
Polymerase subunit beta protein {ECO:0000313|EMBL:KKW01364.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
hypothetical protein
DNA polymerase subunit beta
gwc2_scaffold_3438_19
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

17984..18430
-----------------
DNA (447bp)
protein (149aa)
Putative glycoprotease family protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_20
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(18408..19589)
-----------------
DNA (1182bp)
protein (394aa)
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
DNA polymerase IV
DNA polymerase IV
gwc2_scaffold_3438_21
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(19628..20251)
-----------------
DNA (624bp)
protein (208aa)
transcriptional repressor, lexa family; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
transcriptional repressor, lexa family
LexA repressor
gwc2_scaffold_3438_22
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(20405..21232)
-----------------
DNA (828bp)
protein (276aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_23
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

21434..21865
-----------------
DNA (432bp)
protein (144aa)
protein mraZ; K03925 MraZ protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
Protein mraZ
Protein MraZ
gwc2_scaffold_3438_24
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

21875..22858
-----------------
DNA (984bp)
protein (328aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000313|EMBL:KKW15240.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
S-adenosyl-methyltransferase MraW
Ribosomal RNA small subunit methyltransferase H
gwc2_scaffold_3438_25
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

22855..23229
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
gwc2_scaffold_3438_26
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

23322..25109
-----------------
DNA (1788bp)
protein (596aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase
gwc2_scaffold_3438_27
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

25106..26410
-----------------
DNA (1305bp)
protein (435aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKW15243.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
gwc2_scaffold_3438_28
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

26643..27251
-----------------
DNA (609bp)
protein (203aa)
Plastocyanin {ECO:0000313|EMBL:KKW15244.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Plastocyanin
gwc2_scaffold_3438_29
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(27389..28285)
-----------------
DNA (897bp)
protein (299aa)
PfkB domain protein {ECO:0000313|EMBL:KKW15245.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
PfkB domain-containing protein
PfkB domain protein
gwc2_scaffold_3438_30
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

28613..29776
-----------------
DNA (1164bp)
protein (388aa)
purH; Bifunctional purine biosynthesis protein PurH (EC:2.1.2.3)
Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:KKW15246.1}; Flags: Fragment;; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2
Phosphoribosylaminoimidazolecarboxamide formyltransferase (Fragment)
Displaying 30 items

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