ggKbase home page

gwa2_scaffold_573

Alias: GWA2_CP_megabin_Ab397_90

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_573_1
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

199..2154
-----------------
DNA (1956bp)
protein (652aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit
gwa2_scaffold_573_2

Not on your lists

2158..2841
-----------------
DNA (684bp)
protein (228aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKT55870.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
putative macrolide efflux ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
gwa2_scaffold_573_3

Not on your lists

2844..4082
-----------------
DNA (1239bp)
protein (413aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:KKT55871.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
hypothetical protein
Macrolide export ATP-binding/permease protein MacB
gwa2_scaffold_573_4
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

4298..4750
-----------------
DNA (453bp)
protein (151aa)
putative transcription termination factor Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
putative transcription termination factor
N utilization substance protein B homolog
gwa2_scaffold_573_5
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

4764..5462
-----------------
DNA (699bp)
protein (233aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
hypothetical protein
Ribonuclease 3
gwa2_scaffold_573_6
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

5453..7126
-----------------
DNA (1674bp)
protein (558aa)
general secretory pathway protein E; K02454 general secretion pathway protein E Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
hypothetical protein
General secretory pathway protein E
gwa2_scaffold_573_7
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

7138..8025
-----------------
DNA (888bp)
protein (296aa)
cARKD; ATP-dependent (S)-NAD(P)H-hydrate dehydratase (EC:4.2.1.136)
putative sugar kinase Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
Predicted sugar kinase, YjeF-related
gwa2_scaffold_573_8
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(8222..9430)
-----------------
DNA (1209bp)
protein (403aa)
coproporphyrinogen III oxidase (EC:1.3.3.3); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen III oxidase
gwa2_scaffold_573_9
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

9667..10431
-----------------
DNA (765bp)
protein (255aa)
transcriptional regulator TrmB Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
transcriptional regulator TrmB
Transcriptional regulator, TrmB
gwa2_scaffold_573_10
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

10428..11543
-----------------
DNA (1116bp)
protein (372aa)
group 1 glycosyl transferase Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
group 1 glycosyl transferase
Glycosyl transferase group 1
gwa2_scaffold_573_11
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

11548..12417
-----------------
DNA (870bp)
protein (290aa)
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
gwa2_scaffold_573_12
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

12442..13743
-----------------
DNA (1302bp)
protein (434aa)
O-antigen polymerase Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
O-antigen polymerase
O-antigen polymerase
gwa2_scaffold_573_13
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(13855..14130)
-----------------
DNA (276bp)
protein (92aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
histone family protein DNA-binding protein
Histone family protein DNA-binding protein
gwa2_scaffold_573_14
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(14135..14935)
-----------------
DNA (801bp)
protein (267aa)
metallophosphoesterase Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
metallophosphoesterase
Metallophosphoesterase
gwa2_scaffold_573_15

Not on your lists

comp(14954..16468)
-----------------
DNA (1515bp)
protein (505aa)
Ribonuclease Y {ECO:0000313|EMBL:KKT55883.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
metal dependent phosphohydrolase
Ribonuclease Y
gwa2_scaffold_573_16

Not on your lists

comp(16498..16701)
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55884.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
gwa2_scaffold_573_17
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(16843..18333)
-----------------
DNA (1491bp)
protein (497aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
gwa2_scaffold_573_18
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(18388..19305)
-----------------
DNA (918bp)
protein (306aa)
putative lipoprotein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
putative lipoprotein
Probable lipoprotein
gwa2_scaffold_573_19

Not on your lists

comp(19561..19788)
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55887.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
gwa2_scaffold_573_20

Not on your lists

comp(19861..20913)
-----------------
DNA (1053bp)
protein (351aa)
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase {ECO:0000313|EMBL:KKT55888.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
D-alanine--D-alanine ligase
gwa2_scaffold_573_21
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(20910..21200)
-----------------
DNA (291bp)
protein (97aa)
helix-turn-helix domain-containing protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein
gwa2_scaffold_573_22

Not on your lists

comp(21372..22499)
-----------------
DNA (1128bp)
protein (376aa)
Alanine racemase 2 {ECO:0000313|EMBL:KKS53940.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
Alr2; alanine racemase
Alanine racemase 2
gwa2_scaffold_573_23
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(22556..25309)
-----------------
DNA (2754bp)
protein (918aa)
chaperone ATPase Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
hypothetical protein
ATP-dependent Clp protease ATPase subunit
gwa2_scaffold_573_24
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(25423..27408)
-----------------
DNA (1986bp)
protein (662aa)
VanW family protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
VanW family protein
VanW family protein
gwa2_scaffold_573_25
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(27392..27619)
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
gwa2_scaffold_573_26
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(27626..28144)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
Small heat shock protein
Protein containing Heat shock protein Hsp20 domain
gwa2_scaffold_573_27
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

29561..30571
-----------------
DNA (1011bp)
protein (337aa)
ruvB; Holliday junction ATP-dependent DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase RuvB
gwa2_scaffold_573_28
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(30627..31571)
-----------------
DNA (945bp)
protein (315aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
glpX; fructose 1,6-bisphosphatase II
Fructose-1,6-bisphosphatase
gwa2_scaffold_573_29
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(31662..32969)
-----------------
DNA (1308bp)
protein (436aa)
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
phosphoglycerate kinase
Phosphoglycerate kinase
gwa2_scaffold_573_30
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(33026..33577)
-----------------
DNA (552bp)
protein (184aa)
Alanine dehydrogenase
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
Displaying items 1-30 of 60 in total

View Taxonomy