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GWB1_scaffold_1402

Alias: GWB1_UNK_110440

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_scaffold_1402_1
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(3..1400)
DNA (1398bp) protein (466aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83447.1}; Flags: Fragment;; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
GWB1_scaffold_1402_2
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(1409..2812)
DNA (1404bp) protein (468aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83448.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
GWB1_scaffold_1402_3
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(2822..3592)
DNA (771bp) protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83449.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
GWB1_scaffold_1402_4
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(3639..4451)
DNA (813bp) protein (271aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
ksgA; dimethyladenosine transferase
Ribosomal RNA small subunit methyltransferase A
GWB1_scaffold_1402_5
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4448..4825)
DNA (378bp) protein (126aa)
transposase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
transposase
Transposase
GWB1_scaffold_1402_6
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(4846..5097)
DNA (252bp) protein (84aa)
Transposase {ECO:0000313|EMBL:KKQ83452.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
Transposase
GWB1_scaffold_1402_7
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(5155..7122)
DNA (1968bp) protein (656aa)
ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKQ83453.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
ATP-dependent DNA helicase PcrA
ATP-dependent DNA helicase PcrA
GWB1_scaffold_1402_8
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

7469..8326
DNA (858bp) protein (286aa)
Peptidase M23 family protein {ECO:0000313|EMBL:KKQ83454.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
peptidase M23 family protein
Peptidase M23 family protein
GWB1_scaffold_1402_9
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(8361..9908)
DNA (1548bp) protein (516aa)
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Mg chelatase-like protein
Mg chelatase-related protein
GWB1_scaffold_1402_10
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(9905..10264)
DNA (360bp) protein (120aa)
Binding protein, DksA/TraR protein {ECO:0000313|EMBL:KKQ83456.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
hypothetical protein
DNA binding protein, DksA/TraR
GWB1_scaffold_1402_11
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(10293..11195)
DNA (903bp) protein (301aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
GWB1_scaffold_1402_12
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(11214..11753)
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83458.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
hypothetical protein
Putative uncharacterized protein
GWB1_scaffold_1402_13
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(11871..12137)
DNA (267bp) protein (89aa)
SSU ribosomal protein S15P Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
SSU ribosomal protein S15P
30S ribosomal protein S15
GWB1_scaffold_1402_14
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

12292..13173
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKR30953.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
putative Tyrosine recombinase xerD
Tyrosine recombinase XerC
GWB1_scaffold_1402_15
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

13255..14442
DNA (1188bp) protein (396aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
NusA antitermination factor
NusA antitermination factor
GWB1_scaffold_1402_16
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

14474..15001
DNA (528bp) protein (176aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000313|EMBL:KKR30955.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
Inorganic pyrophosphatase
GWB1_scaffold_1402_17
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

15065..15823
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR30956.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
hypothetical protein
Uncharacterized protein
GWB1_scaffold_1402_18
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

15846..16133
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
GWB1_scaffold_1402_19
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

16207..16782
DNA (576bp) protein (192aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit
GWB1_scaffold_1402_20
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

Not on your lists

16891..18420
DNA (1530bp) protein (510aa)
Ribonuclease Y {ECO:0000313|EMBL:KKR30959.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
2,3 cyclic-nucleotide 2-phosphodiesterase
Ribonuclease Y
GWB1_scaffold_1402_21
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

18569..18841
DNA (273bp) protein (91aa)
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Histone-like DNA-binding protein
Histone-like DNA-binding protein
GWB1_scaffold_1402_22
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(18901..20376)
DNA (1476bp) protein (492aa)
PolyA polymerase {ECO:0000313|EMBL:KKQ83468.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
polyA polymerase
PolyA polymerase
GWB1_scaffold_1402_23
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(20432..20947)
DNA (516bp) protein (172aa)
putative General secretion pathway protein GspG Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
putative General secretion pathway protein GspG
Putative uncharacterized protein
GWB1_scaffold_1402_24
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

21143..21427
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
GWB1_scaffold_1402_25
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

21435..21995
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
Type II secretion system protein G
Predicted secretion system X protein GspG-like3
GWB1_scaffold_1402_26
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(22779..23270)
DNA (492bp) protein (164aa)
putative General secretion pathway protein GspG Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
putative General secretion pathway protein GspG
Type II secretion system protein G
GWB1_scaffold_1402_27
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(23326..23724)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ83473.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
hypothetical protein
UPF0102 protein NAMH_0259
GWB1_scaffold_1402_28
Parcubacteria bacterium GW2011_GWB1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(24310..25080)
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:KKQ83474.1}; TaxID=1618864 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_38_8.;"
xthA; exodeoxyribonuclease III
Exodeoxyribonuclease III
Displaying 28 items

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