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gwa2_scaffold_525

Alias: zPERA2_38_36_8

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Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_525_31
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

34457..34975
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR04751.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
(db=HMMPfam db_id=PF02577 from=10 to=136 evalue=1.9e-36 interpro_id=IPR003729 interpro_description=Domain of unknown function DUF151)
gwa2_scaffold_525_32
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(34993..35613)
DNA (621bp) protein (207aa)
Endonuclease III, endonuclease III {ECO:0000313|EMBL:KKR04750.1}; EC=4.2.99.18 {ECO:0000313|EMBL:KKR04750.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YCZ3_DICT6
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
gwa2_scaffold_525_33
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(35617..37311)
DNA (1695bp) protein (565aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04749.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=531 to=561 evalue=0.00053)
gwa2_scaffold_525_34
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(37372..39039)
DNA (1668bp) protein (556aa)
Peptidase, M23/M37 family n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAR3_9FIRM
Peptidase M23B {ECO:0000313|EMBL:KKR04748.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
lipoprotein
coiled-coil (db=Coil db_id=coil from=99 to=120 evalue=NA)
gwa2_scaffold_525_35
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(39115..40914)
DNA (1800bp) protein (600aa)
LYTIC TRANSGLYCOSYLASE Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=551 to=592)
LYTIC TRANSGLYCOSYLASE (db=HMMPanther db_id=PTHR21666:SF10 from=288 to=346 evalue=0.00084)
PEPTIDASE-RELATED (db=HMMPanther db_id=PTHR21666 from=288 to=346 evalue=0.00084)
gwa2_scaffold_525_36
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


41056..41334
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1Y1_9PROT
50S ribosomal protein L27 Tax=zPERA2_38_36
rpmA; Ribosomal protein L27
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_525_37
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

41356..41979
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04745.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=22 to=43 evalue=NA)
seg (db=Seg db_id=seg from=31 to=34)
gwa2_scaffold_525_38
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(42003..42242)
DNA (240bp) protein (80aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=4 to=20)
gwa2_scaffold_525_39
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(42303..43448)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RM64_MOOTA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR04743.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
(db=HMMPfam db_id=PF05559 from=4 to=346 evalue=4.6e-113 interpro_id=IPR008482 interpro_description=Protein of unknown function DUF763)
gwa2_scaffold_525_40
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

43599..43865
DNA (267bp) protein (89aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=3 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
gwa2_scaffold_525_41
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

43893..44042
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZV31_DESOH
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=2 to=20)
gwa2_scaffold_525_42
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

44084..45070
DNA (987bp) protein (329aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=6 to=18)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=22 evalue=6.0)
gwa2_scaffold_525_43
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

45186..45518
DNA (333bp) protein (111aa)
Putative transcriptional regulator n=1 Tax=Brevibacillus sp. CF112 RepID=J2H9K0_9BACL
Putative transcriptional regulator Tax=zPERA2_38_36
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=91 evalue=1.8e-17)
gwa2_scaffold_525_44
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

45554..45877
DNA (324bp) protein (108aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=8 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwa2_scaffold_525_45
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

45909..47420
DNA (1512bp) protein (504aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9W5V2_9ACTO
Predicted protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=132 to=145)
gwa2_scaffold_525_46
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

47437..48024
DNA (588bp) protein (196aa)
Peptidase C60 family protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0HZU7_CALAS
Peptidase C60 family protein Tax=zPERA2_38_36
Sortase Surface protein transpeptidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
gwa2_scaffold_525_47
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

48267..48443
DNA (177bp) protein (59aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_48
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(48744..49370)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PKD2_9ZZZZ
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=110 to=193 evalue=2.5e-06)
gwa2_scaffold_525_49
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(49495..51990)
DNA (2496bp) protein (832aa)
seg Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=594 to=615 evalue=NA)
seg (db=Seg db_id=seg from=759 to=769)
gwa2_scaffold_525_50
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(52066..52437)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04732.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=99 to=120 evalue=NA)
gwa2_scaffold_525_51
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(52449..55079)
DNA (2631bp) protein (877aa)
seg Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=443 to=471 evalue=NA)
seg (db=Seg db_id=seg from=101 to=113)
gwa2_scaffold_525_52
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

55168..56439
DNA (1272bp) protein (424aa)
Trigger factor n=7 Tax=Caldicellulosiruptor RepID=TIG_CALBD
Trigger factor, trigger factor {ECO:0000313|EMBL:KKR04730.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
trigger factor
coiled-coil (db=Coil db_id=coil from=125 to=146 evalue=NA)
gwa2_scaffold_525_53
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

56889..57449
DNA (561bp) protein (187aa)
DNA polymerase subunit beta n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RUS9_METFO
Uncharacterized protein {ECO:0000313|EMBL:KKR05149.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
nucleotidyltransferase domain-containing protein
coiled-coil (db=Coil db_id=coil from=32 to=53 evalue=NA)
gwa2_scaffold_525_54
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


57739..58194
DNA (456bp) protein (152aa)
50S ribosomal protein L19 n=2 Tax=Leptotrichiaceae RepID=D1ALR8_SEBTE
50S ribosomal protein L19, large subunit ribosomal protein L19 {ECO:0000313|EMBL:KKR05150.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_1
50S ribosomal protein L19
seg (db=Seg db_id=seg from=134 to=145)
gwa2_scaffold_525_55
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

58289..58882
DNA (594bp) protein (198aa)
Ribonuclease HII, ribonuclease HII {ECO:0000313|EMBL:KKR05151.1}; EC=3.1.26.4 {ECO:0000313|EMBL:KKR05151.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8LU34_CLOCD
seg (db=Seg db_id=seg from=22 to=37)
gwa2_scaffold_525_56
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

58879..59994
DNA (1116bp) protein (372aa)
Pyruvyl-transferase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFT5_9BACI
Pyruvyl-transferase Tax=zPERA2_38_36
pyruvyltransferase
seg (db=Seg db_id=seg from=61 to=73)
gwa2_scaffold_525_57
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

60039..61049
DNA (1011bp) protein (337aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=40 to=51)
gwa2_scaffold_525_58
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

61083..62042
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05154.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=6 to=19)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=5.0)
gwa2_scaffold_525_59
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(62063..62854)
DNA (792bp) protein (264aa)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Methanosarcina acetivorans C2A RepID=Q8TNU5_METAC rbh
Glucose-1-phosphate thymidylyltransferase Tax=zPERA2_38_36
rbfA; glucose-1-phosphate thymidylyltransferase
GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF13 from=9 to=229 evalue=7.2e-104 interpro_id=IPR005907 interpro_description=Glucose-1-phosphate thymidylyltransferase, short form GO=Molecular Function: glucose-1-phosphate thymidylyltransferase activity (GO:0008879), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
gwa2_scaffold_525_60
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(62889..63725)
DNA (837bp) protein (279aa)
dTDP-4-dehydrorhamnose reductase, RfbD (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Turicibacter sp. HGF1 RepID=F0HB80_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKQ70892.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
rmlD: dTDP-4-dehydrorhamnose reductase (db=HMMTigr db_id=TIGR01214 from=2 to=278 evalue=1.1e-97 interpro_id=IPR005913 interpro_description=dTDP-4-dehydrorhamnose reductase GO=Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
Displaying items 31-60 of 89 in total

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