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gwa2_scaffold_525

Alias: zPERA2_38_36_8

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_525_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

2..349
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04944.1}; Flags: Fragment;; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_525_2
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

461..1420
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04945.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=81 to=98)
gwa2_scaffold_525_3
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

1417..2346
DNA (930bp) protein (310aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=102 to=111)
gwa2_scaffold_525_4
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

2358..7130
DNA (4773bp) protein (1591aa)
hypothetical protein cdivTM_30108 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00016B2684
Uncharacterized protein {ECO:0000313|EMBL:KKR04947.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_525_5
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

7149..9437
DNA (2289bp) protein (763aa)
PKD domain protein n=1 Tax=Polymorphum gilvum SL003B-26A1 RepID=F2J1S5_POLGS
PKD domain protein Tax=zPERA2_38_36
PKD domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
gwa2_scaffold_525_6
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

9583..10566
DNA (984bp) protein (328aa)
Mucin-17 {ECO:0000313|EMBL:KKR04949.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=39 to=48)
gwa2_scaffold_525_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

10603..12894
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=I7MKB3_TETTS
Uncharacterized protein {ECO:0000313|EMBL:KKR04950.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51)
gwa2_scaffold_525_8
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

12897..15272
DNA (2376bp) protein (792aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZFQ9_DICPU
Putative uncharacterized protein Tax=zPERA2_38_36
ftsY; signal recognition particle GTPase FtsY
coiled-coil (db=Coil db_id=coil from=637 to=658 evalue=NA)
gwa2_scaffold_525_9
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

15447..16067
DNA (621bp) protein (207aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GNN4_BACCN
Lysine exporter protein (LYSE/YGGA) Tax=zPERA2_38_36
lysine exporter protein LysE/YggA
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
gwa2_scaffold_525_10
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

16198..17118
DNA (921bp) protein (307aa)
Integral membrane protein TerC n=1 Tax=Marivirga tractuosa DSM 4126 RepID=E4TN58_MARTH rbh
Integral membrane protein terc, tellurite resistance protein TerC {ECO:0000313|EMBL:KKR04953.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_3
integral membrane protein terc
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwa2_scaffold_525_11
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(17096..19495)
DNA (2400bp) protein (800aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51)
seg (db=Seg db_id=seg from=589 to=608)
gwa2_scaffold_525_12
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

19634..20173
DNA (540bp) protein (180aa)
NADPH-dependent FMN reductase n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J6A8_NOSP7
NADPH-dependent FMN reductase Tax=zPERA2_38_36
NADPH-dependent FMN reductase
Flavoproteins (db=superfamily db_id=SSF52218 from=5 to=173 evalue=1.1e-27)
gwa2_scaffold_525_13
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

20170..20793
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Microlunatus phosphovorus NM-1 RepID=F5XPU6_MICPN
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
gwa2_scaffold_525_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(20800..21252)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0P5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKR04957.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=8 to=25)
gwa2_scaffold_525_15
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(21328..22554)
DNA (1227bp) protein (409aa)
ABC transporter, permease protein n=1 Tax=sediment metagenome RepID=D9PI56_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR04958.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
multidrug ABC transporter substrate-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwa2_scaffold_525_16
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(22541..23257)
DNA (717bp) protein (239aa)
ABC-type transport system n=2 Tax=Eggerthella RepID=F7UVR0_EEGSY
ABC-type transport system Tax=zPERA2_38_36
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwa2_scaffold_525_17
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(23279..25063)
DNA (1785bp) protein (595aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBV6_9CHLR
RND family efflux transporter MFP subunit, HlyD family secretion protein {ECO:0000313|EMBL:KKR04960.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011
Efflux transporter, RND family, MFP subunit
coiled-coil (db=Coil db_id=coil from=132 to=153 evalue=NA)
gwa2_scaffold_525_18
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(25089..25562)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04961.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwa2_scaffold_525_19
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(25574..25996)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04962.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
seg (db=Seg db_id=seg from=106 to=123)
gwa2_scaffold_525_20
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(26020..26550)
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=4 Tax=Geobacillus RepID=I0U303_BACTR
Sigma-24 (FecI-like protein), RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKR04963.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2
ECF subfamily RNA polymerase sigma-24 subunit
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=7 to=172 evalue=1.9e-46 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698
gwa2_scaffold_525_21
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

26755..27105
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LED5_SYNFM
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:KKR04964.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
RNA-binding proteins (RRM domain)
seg (db=Seg db_id=seg from=88 to=116)
gwa2_scaffold_525_22
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

27258..27521
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus EPS RepID=E6V7X2_VARPE
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=6 to=23)
gwa2_scaffold_525_23
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

27636..28568
DNA (933bp) protein (311aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=63 to=75)
gwa2_scaffold_525_24
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(28573..29550)
DNA (978bp) protein (326aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
Cellulosome-anchoring protein Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=7 to=18)
gwa2_scaffold_525_25
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

29678..30166
DNA (489bp) protein (163aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_26
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

30229..31527
DNA (1299bp) protein (433aa)
Asparaginyl-tRNA synthetase, asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KKR04969.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KKR04969.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregr
Asparagine--tRNA ligase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8V1_9BACI rbh
asparaginyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=251 to=272 evalue=NA)
gwa2_scaffold_525_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(31556..32269)
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04970.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=19 to=28)
gwa2_scaffold_525_28
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

32438..32935
DNA (498bp) protein (166aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=6 to=23)
gwa2_scaffold_525_29
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

32898..33287
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ70861.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
gwa2_scaffold_525_30
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

33338..34438
DNA (1101bp) protein (367aa)
Protein PyrD, dihydroorotate dehydrogenase (Fumarate) {ECO:0000313|EMBL:KKR04752.1}; EC=1.3.98.1 {ECO:0000313|EMBL:KKR04752.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrini
Dihydroorotate dehydrogenase 2 (Fragment) n=1 Tax=Vibrio caribbenthicus ATCC BAA-2122 RepID=E3BPU2_9VIBR
Dihydroorotate dehydrogenase 2
seg (db=Seg db_id=seg from=200 to=215)
Displaying items 1-30 of 89 in total

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